RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SSMEM1Q8WWF3 244 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 LPGAT1Q92604 370 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 ARSGQ96EG1 525 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 OLFM1Q99784 485 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 NYXQ9GZU5 481 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 WNT5BQ9H1J7 359 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 CCDC177Q9NQR7 707 aaPredicted RBP4.48□□□□□ -1.69
MDM2-220ENST00000496959 MAN2C1Q9NTJ4 1040 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 PANK4Q9NVE7 773 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 CSAG2Q9Y5P2 127 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 IBTKQ9P2D0 1353 aaPredicted RBP4.48□□□□□ -1.69
MDM2-220ENST00000496959 NUP98P52948 1817 aa4.48□□□□□ -1.69
MDM2-220ENST00000496959 LTBP1Q14766 1721 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 FSD2A1L4K1 749 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 JAK1P23458 1154 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 TAF10Q12962 218 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 HERC3Q15034 1050 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 TMEM211Q6ICI0 200 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 C11orf63Q6NUN7 778 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 USP50Q70EL3 339 aaPredicted RBP4.47□□□□□ -1.69
MDM2-220ENST00000496959 BTN2A1Q7KYR7 527 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 NBPF5PQ86XG9 351 aaPredicted RBP4.47□□□□□ -1.69
MDM2-220ENST00000496959 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 TAGAPQ8N103 731 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.47□□□□□ -1.69
MDM2-220ENST00000496959 MAPK15Q8TD08 544 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 SLAMF9Q96A28 289 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 C10orf90Q96M02 699 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 SFXN2Q96NB2 322 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 GHITMQ9H3K2 345 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 OPA3Q9H6K4 179 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 THEGQ9P2T0 379 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 STUB1Q9UNE7 303 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 PPP2R2CQ9Y2T4 447 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 CASP8AP2Q9UKL3 1982 aa4.47□□□□□ -1.69
MDM2-220ENST00000496959 MYH15Q9Y2K3 1946 aa4.46□□□□□ -1.69
MDM2-220ENST00000496959 PCNX3Q9H6A9 2034 aa4.46□□□□□ -1.69
MDM2-220ENST00000496959 ANKRD36CQ5JPF3 1778 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 TMEM221A6NGB7 291 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 SERINC4A6NH21 518 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 IDH3BO43837 385 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 SEC24AO95486 1093 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 VTNP04004 478 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CSH1P0DML2 217 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CSH2P0DML3 217 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 SLC2A2P11168 524 aaPredicted RBP4.46□□□□□ -1.7
MDM2-220ENST00000496959 PRKACGP22612 351 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 LHCGRP22888 699 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 PAX3P23760 479 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.7
MDM2-220ENST00000496959 HOXD13P35453 343 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CLNS1AP54105 237 aaKnown RBP4.46□□□□□ -1.7
MDM2-220ENST00000496959 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 EPS8Q12929 822 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 RIGQ13278 110 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 NFATC2Q13469 925 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 PCLAFQ15004 111 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 WTAPQ15007 396 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 SYT14P1Q58G82 188 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 SLC35D3Q5M8T2 416 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CDC20BQ86Y33 519 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 ERC1Q8IUD2 1116 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 PRSS33Q8NF86 280 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CALML4Q96GE6 196 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CAPNS2Q96L46 248 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 NECTIN4Q96NY8 510 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 POLR3GLQ9BT43 218 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 TRPV4Q9HBA0 871 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 EQTNQ9NQ60 294 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 GIMAP4Q9NUV9 329 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 VPS28Q9UK41 221 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
MDM2-220ENST00000496959 CEMIPQ8WUJ3 1361 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 NPC1L1Q9UHC9 1359 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 SOCS3O14543 225 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 SMIM18P0DKX4 95 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 PTPN3P26045 913 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 SLC39A6Q13433 755 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 NTRK2Q16620 822 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 MTHFSDQ2M296 383 aaKnown RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 APPL2Q8NEU8 664 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 OR2L2Q8NH16 312 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 OR1L3Q8NH93 324 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 JAKMIP2Q96AA8 810 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 CENPTQ96BT3 561 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 SPACA9Q96E40 222 aaPredicted RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 ZNF486Q96H40 463 aaPredicted RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 NKX3-1Q99801 234 aaPredicted RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 SDF4Q9BRK5 362 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 PANK3Q9H999 370 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 Q9N2K0 584 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 TEX10Q9NXF1 929 aaPredicted RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 C19orf25Q9UFG5 118 aaPredicted RBP4.45□□□□□ -1.7
MDM2-220ENST00000496959 MAN1B1Q9UKM7 699 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 KDM3BQ7LBC6 1761 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 KIF7Q2M1P5 1343 aa4.45□□□□□ -1.7
MDM2-220ENST00000496959 IGKV6D-41A0A0C4DH26 115 aa4.44□□□□□ -1.7
MDM2-220ENST00000496959 DDHD2O94830 711 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms