RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FAM60AQ9NP50 221 aa17.5■□□□□ 0.39
RGP1-202ENST00000496906 FARSBQ9NSD9 589 aaKnown RBP17.5■□□□□ 0.39
RGP1-202ENST00000496906 BTRCQ9Y297 605 aa17.5■□□□□ 0.39
RGP1-202ENST00000496906 PCDHGA4Q9Y5G9 962 aa17.5■□□□□ 0.39
RGP1-202ENST00000496906 SLCO1B7G3V0H7 640 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 HDAC3O15379 428 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ULK1O75385 1050 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 CHEK2O96017 543 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 JUNP05412 331 aaKnown RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 PCNAP12004 261 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 NEK2P51955 445 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 E2F1Q01094 437 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 CYP4F3Q08477 520 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PDCD2Q16342 344 aaPredicted RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 CCDC157Q569K6 752 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 C10orf62Q5T681 223 aaPredicted RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 RNF165Q6ZSG1 346 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 MAVSQ7Z434 540 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ARHGAP22Q7Z5H3 698 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 VN1R5Q7Z5H4 357 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 KMT5CQ86Y97 462 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 WDR75Q8IWA0 830 aaKnown RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 MFSD9Q8NBP5 474 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 SELENOMQ8WWX9 145 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 CCDC74BQ96LY2 380 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 OR2A5Q96R48 311 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 SOHLH2Q9NX45 425 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 VTI1BQ9UEU0 232 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 USH1CQ9Y6N9 552 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PCNX2A6NKB5 2137 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 A0A0J9YVX5 310 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 A8MU76 341 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ZNF195O14628 629 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PDYNP01213 254 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ALOX15P16050 662 aaPredicted RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 DRD4P21917 467 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 GSTM2P28161 218 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 AHRP35869 848 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 MLLT3P42568 568 aaPredicted RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 SEPHS1P49903 392 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PDX1P52945 283 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 BTKQ06187 659 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ABRAXAS2Q15018 415 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 DNAJC22Q8N4W6 341 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 TTLQ8NG68 377 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 HUS1BQ8NHY5 278 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 MTFMTQ96DP5 389 aaKnown RBP17.49■□□□□ 0.39
RGP1-202ENST00000496906 HBEGFQ99075 208 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 EPN3Q9H201 632 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PDE7BQ9NP56 450 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 ZFP69BQ9UJL9 534 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 PTGDR2Q9Y5Y4 395 aa17.49■□□□□ 0.39
RGP1-202ENST00000496906 SLC30A4O14863 429 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 PIP5K1BO14986 540 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 NELFEP18615 380 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 SERPINB1P30740 379 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 PIK3CBP42338 1070 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 GABRA4P48169 554 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 INHBCP55103 352 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 HSD11B2P80365 405 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 INSM1Q01101 510 aaPredicted RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 ZNF33BQ06732 778 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 ZFP36L1Q07352 338 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 DDX39BQ13838 428 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 SGO1Q5FBB7 561 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 SCIMPQ6UWF3 145 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 VN1R4Q7Z5H5 301 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 D2HGDHQ8N465 521 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 RNF175Q8N4F7 328 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 ZNF473Q8WTR7 871 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 THAP11Q96EK4 314 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 SEC16BQ96JE7 1060 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 MTERF1Q99551 399 aaKnown RBP17.48■□□□□ 0.39
RGP1-202ENST00000496906 TRIM55Q9BYV6 548 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 NUF2Q9BZD4 464 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 NPHS2Q9NP85 383 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 ADGRE2Q9UHX3 823 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 AP1M2Q9Y6Q5 423 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 CEP250Q9BV73 2442 aa17.48■□□□□ 0.39
RGP1-202ENST00000496906 COL27A1Q8IZC6 1860 aaPredicted RBP17.47■□□□□ 0.39
RGP1-202ENST00000496906 SERTM1A2A2V5 107 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 ANKDD1BA6NHY2 528 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 HCRTR1O43613 425 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 DKK1O94907 266 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
RGP1-202ENST00000496906 ARL4DP49703 201 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 CYP4F2P78329 520 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 TRA2AQ13595 282 aaKnown RBP eCLIP17.47■□□□□ 0.39
RGP1-202ENST00000496906 DEFB110Q30KQ9 67 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 XKR7Q5GH72 579 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 ZC3H12BQ5HYM0 836 aaKnown RBP17.47■□□□□ 0.39
RGP1-202ENST00000496906 FRMPD2BQ6IN97 320 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 TRIM46Q7Z4K8 759 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 B3GNT8Q7Z7M8 397 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 SLCO6A1Q86UG4 719 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 ALYREFQ86V81 257 aaKnown RBP17.47■□□□□ 0.39
RGP1-202ENST00000496906 DDIASQ8IXT1 998 aa17.47■□□□□ 0.39
RGP1-202ENST00000496906 RCBTB1Q8NDN9 531 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms