RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CMPK1P30085 196 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 PHBP35232 272 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 OCA2Q04671 838 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 KLC1Q07866 573 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.7□□□□□ -0.22
CXCL12-208ENST00000496375 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 PRMT9Q6P2P2 845 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 IGFL2Q6UWQ7 119 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 LURAP1LQ8IV03 231 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 CPNE9Q8IYJ1 553 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 PRSS58Q8IYP2 241 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 OR9A1PQ8NGU1 263 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 DNAJB14Q8TBM8 379 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 STT3BQ8TCJ2 826 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 ASB11Q8WXH4 323 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 ANKRD7Q92527 254 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
CXCL12-208ENST00000496375 C10orf90Q96M02 699 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 CYTH2Q99418 400 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
CXCL12-208ENST00000496375 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 DPH7Q9BTV6 452 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 EPS8L2Q9H6S3 715 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 AGPAT4Q9NRZ5 378 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF282Q9UDV7 671 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-208ENST00000496375 SLC5A6Q9Y289 635 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 CRYBG3Q68DQ2 2970 aa13.7□□□□□ -0.22
CXCL12-208ENST00000496375 CENPEQ02224 2701 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 ARHGEF33A8MVX0 844 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 H0YGG7 62 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 ZGLP1P0C6A0 271 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF37AP17032 561 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 FBLP22087 321 aaKnown RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 RGS4P49798 205 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 TAS2R39P59534 338 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 ARF3P61204 181 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 POU4F1Q01851 419 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 Q0VFX4 171 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 SP140Q13342 867 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 TSTA3Q13630 321 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 NAA25Q14CX7 972 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 MUM1Q2TAK8 710 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 UBAP2Q5T6F2 1119 aaKnown RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 GRTP1Q5TC63 336 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 FBXO42Q6P3S6 717 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 PAQR3Q6TCH7 311 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 SUSD1Q6UWL2 747 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 TRMT10CQ7L0Y3 403 aaKnown RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 GPATCH11Q8N954 259 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 SMPDL3AQ92484 453 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 CABS1Q96KC9 395 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 C5orf34Q96MH7 638 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 MRPS30Q9NP92 439 aaKnown RBP13.69□□□□□ -0.22
CXCL12-208ENST00000496375 C3orf18Q9UK00 162 aa13.69□□□□□ -0.22
CXCL12-208ENST00000496375 HEATR5BQ9P2D3 2071 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 POLEQ07864 2286 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 MAP2K7O14733 419 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 SLC16A5O15375 505 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 PIAS1O75925 651 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 CLDN1O95832 211 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 HPP00738 406 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 CATP04040 527 aaKnown RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 MYBL2P10244 700 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 ACPPP15309 386 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 COL8A1P27658 744 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 RPA3P35244 121 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 SPRP35270 261 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 TSFMP43897 325 aaKnown RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 CDC16Q13042 620 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF169Q14929 603 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 ARHGAP19Q14CB8 494 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 VWA2Q5GFL6 755 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 LINC00696Q6ZRV3 163 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 PIWIL4Q7Z3Z4 852 aaKnown RBP13.68□□□□□ -0.22
CXCL12-208ENST00000496375 PPM1NQ8N819 430 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 ST6GALNAC3Q8NDV1 305 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 EEF1AKMT1Q8WVE0 214 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 C8orf44Q96CB5 159 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 PLCD4Q9BRC7 762 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 SYNPO2LQ9H987 977 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF160Q9HCG1 818 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 CELSR2Q9HCU4 2923 aa13.68□□□□□ -0.22
CXCL12-208ENST00000496375 CACNA1DQ01668 2161 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 IGLV3-12A0A075B6K2 115 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 IGKV1-8A0A0C4DH67 115 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 FFAR3O14843 346 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 GPR42O15529 346 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 C8GP07360 202 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 FAM153BP0C7A2 387 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 HSD17B2P37059 387 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms