RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 KCNE1BA0A087WTH5 132 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 PRSS44E7EML9 344 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 GOLGA8MH3BSY2 632 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 EIF3FO00303 357 aaPredicted RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 PRAMEF2O60811 474 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 CRYABP02511 175 aaKnown RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 TBPL1P62380 186 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 ZNF33BQ06732 778 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 LONRF1Q17RB8 773 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 MFSD4BQ5TF39 518 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 SP5Q6BEB4 398 aaPredicted RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 LANCL3Q6ZV70 420 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 CPEB2Q7Z5Q1 589 aaKnown RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 DNAJB8Q8NHS0 232 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 CALML6Q8TD86 181 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 MCOLN3Q8TDD5 553 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 CYTH2Q99418 400 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 C20orf96Q9NUD7 363 aaPredicted RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 C19orf25Q9UFG5 118 aaPredicted RBP20.88■□□□□ 0.93
HDDC3-203ENST00000494993 TEKT2Q9UIF3 430 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 FBXO5Q9UKT4 447 aa20.88■□□□□ 0.93
HDDC3-203ENST00000494993 APCP25054 2843 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 IGHV3-20A0A0C4DH32 117 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 SEC24DO94855 1032 aaPredicted RBP20.87■□□□□ 0.93
HDDC3-203ENST00000494993 MYBL2P10244 700 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 IL1RNP18510 177 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 MST1P26927 711 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 MPP1Q00013 466 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 MINDY4Q4G0A6 757 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 SRRM1Q8IYB3 904 aaKnown RBP20.87■□□□□ 0.93
HDDC3-203ENST00000494993 SHISA5Q8N114 240 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 AGGF1Q8N302 714 aaeCLIP20.87■□□□□ 0.93
HDDC3-203ENST00000494993 MAGOHBQ96A72 148 aaKnown RBP20.87■□□□□ 0.93
HDDC3-203ENST00000494993 THAP11Q96EK4 314 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 AARSD1Q9BTE6 412 aaKnown RBP20.87■□□□□ 0.93
HDDC3-203ENST00000494993 STMN3Q9NZ72 180 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 GTF3C1Q12789 2109 aa20.87■□□□□ 0.93
HDDC3-203ENST00000494993 NCOA6Q14686 2063 aaPredicted RBP20.86■□□□□ 0.93
HDDC3-203ENST00000494993 HAUS5O94927 633 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 UNC5CO95185 931 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 PRF1P14222 555 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 MAGEA3P43357 314 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 XCR1P46094 333 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 CSNK1G2P78368 415 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 PTK6Q13882 451 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 BTBD16Q32M84 506 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 PLAG1Q6DJT9 500 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 TMEM214Q6NUQ4 689 aaKnown RBP20.86■□□□□ 0.93
HDDC3-203ENST00000494993 TMEM207Q6UWW9 146 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 OR51Q1Q8NH59 317 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 MACROD1Q9BQ69 325 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 PCBD2Q9H0N5 130 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 HCN3Q9P1Z3 774 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 SUCOQ9UBS9 1254 aaKnown RBP20.86■□□□□ 0.93
HDDC3-203ENST00000494993 SEC14L3Q9UDX4 400 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 MAD1L1Q9Y6D9 718 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 PKDREJQ9NTG1 2253 aa20.86■□□□□ 0.93
HDDC3-203ENST00000494993 TRGV8A0A0C4DH27 118 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 BCL6P41182 706 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 SRSF11Q05519 484 aaKnown RBP20.85■□□□□ 0.93
HDDC3-203ENST00000494993 LRRC8EQ6NSJ5 796 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 RASGEF1CQ8N431 466 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 CAMKVQ8NCB2 501 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 ITLN2Q8WWU7 325 aaPredicted RBP20.85■□□□□ 0.93
HDDC3-203ENST00000494993 TM4SF19Q96DZ7 209 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 SIGLEC10Q96LC7 697 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 CCDC138Q96M89 665 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 FAM167BQ9BTA0 163 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 UNKQ9C0B0 810 aaKnown RBP20.85■□□□□ 0.93
HDDC3-203ENST00000494993 TRMT6Q9UJA5 497 aaKnown RBP20.85■□□□□ 0.93
HDDC3-203ENST00000494993 ADAMTS6Q9UKP5 1117 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 SH2B3Q9UQQ2 575 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 PDE10AQ9Y233 779 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 NEU2Q9Y3R4 380 aa20.85■□□□□ 0.93
HDDC3-203ENST00000494993 A8MUI8 341 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 SGK494L7N484 410 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 COILP38432 576 aaPredicted RBP20.84■□□□□ 0.93
HDDC3-203ENST00000494993 AGTR2P50052 363 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 PMP22Q01453 160 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ART3Q13508 389 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 NAA30Q147X3 362 aaPredicted RBP20.84■□□□□ 0.93
HDDC3-203ENST00000494993 HSP90AA5PQ58FG0 334 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ZNF766Q5HY98 468 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 UGT3A1Q6NUS8 523 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 H3F3CQ6NXT2 135 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ANKRD37Q7Z713 158 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 C17orf64Q86WR6 236 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 NAT8LQ8N9F0 302 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ZCCHC10Q8TBK6 192 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 CCDC120Q96HB5 630 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ZNF354BQ96LW1 612 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 ANKHQ9HCJ1 492 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 IARS2Q9NSE4 1012 aaKnown RBP20.84■□□□□ 0.93
HDDC3-203ENST00000494993 CACNA1CQ13936 2221 aa20.84■□□□□ 0.93
HDDC3-203ENST00000494993 FEZF1A0PJY2 475 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 OR2W5A6NFC9 320 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 CCL21O00585 134 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 C8GP07360 202 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 CA7P43166 264 aa20.83■□□□□ 0.93
HDDC3-203ENST00000494993 RGS4P49798 205 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms