RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 DPH2Q9BQC3 489 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 EFHD1Q9BUP0 239 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 MRPL46Q9H2W6 279 aaKnown RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 NDOR1Q9UHB4 597 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 MRPS18BQ9Y676 258 aaKnown RBP12.92□□□□□ -0.34
COL1A1-208ENST00000494334 HEATR5BQ9P2D3 2071 aa12.92□□□□□ -0.34
COL1A1-208ENST00000494334 A0A1B0GX78 115 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 TRBC2A0A5B9 178 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 LRRC14BA6NHZ5 514 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 C21orf140B9A014 251 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 CLGNO14967 610 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 DSCR3O14972 297 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 GSTA1P08263 222 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 ITGAXP20702 1163 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 EMP3P54852 163 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 SNRPNP63162 240 aaKnown RBP12.91□□□□□ -0.34
COL1A1-208ENST00000494334 CXADRP78310 365 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 VAC14Q08AM6 782 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 ARHGAP40Q5TG30 622 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 ASPGQ86U10 573 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 RIBC1Q8N443 379 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-208ENST00000494334 PTGR2Q8N8N7 351 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-208ENST00000494334 ANKRD53Q8N9V6 530 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 SLC13A3Q8WWT9 602 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 PHF21BQ96EK2 531 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 SLC45A3Q96JT2 553 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 C10orf90Q96M02 699 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 MACROD1Q9BQ69 325 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 AIF1LQ9BQI0 150 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 PRORYQ9H606 182 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 SLC22A11Q9NSA0 550 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 GEMIN8Q9NWZ8 242 aaKnown RBP12.91□□□□□ -0.34
COL1A1-208ENST00000494334 OPTCQ9UBM4 332 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 DCDC2Q9UHG0 476 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 KCND3Q9UK17 655 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
COL1A1-208ENST00000494334 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
COL1A1-208ENST00000494334 STX16-NPEPL1H3BU86 382 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 STX16O14662 325 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 SMIM24O75264 130 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 H2AFYO75367 372 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 KATNA1O75449 491 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 SIX3O95343 332 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 ONECUT2O95948 504 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 CXCR2P25025 360 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 DOC2AQ14183 400 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 E2F2Q14209 437 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 SLBPQ14493 270 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 RBBP5Q15291 538 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 NKAIN1Q4KMZ8 207 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 XKR6Q5GH73 641 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 METTL27Q8N6F8 245 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 TEX9Q8N6V9 391 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 SNRNP27Q8WVK2 155 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 STARD8Q92502 1023 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 TMEM109Q9BVC6 243 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 GPR87Q9BY21 358 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 NLNQ9BYT8 704 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 COPG2Q9UBF2 871 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 LGALS13Q9UHV8 139 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 ZFP69BQ9UJL9 534 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 TMCO1Q9UM00 188 aa12.9□□□□□ -0.34
COL1A1-208ENST00000494334 TNPO3Q9Y5L0 923 aaKnown RBP12.9□□□□□ -0.34
COL1A1-208ENST00000494334 USP24Q9UPU5 2620 aa12.9□□□□□ -0.35
COL1A1-208ENST00000494334 SEC16AO15027 2179 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 E2F3O00716 465 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 NKX2-8O15522 239 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 FOXS1O43638 330 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 GLRA3O75311 464 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 WFS1O76024 890 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 EPB42P16452 691 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 KRT4P19013 534 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 CD22P20273 847 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 PTPN4P29074 926 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 EEF1DP29692 281 aaKnown RBP12.89□□□□□ -0.35
COL1A1-208ENST00000494334 AHRP35869 848 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 CASP2P42575 452 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 OR1D4P47884 311 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 CCT5P48643 541 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 RPS18P62269 152 aaKnown RBP12.89□□□□□ -0.35
COL1A1-208ENST00000494334 NFKB2Q00653 900 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 IRF8Q02556 426 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 SLC18A2Q05940 514 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 CHIT1Q13231 466 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 PWP1Q13610 501 aa12.89□□□□□ -0.35
COL1A1-208ENST00000494334 FAM53BQ14153 422 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms