RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 PDE10AQ9Y233 779 aa22.6■■□□□ 1.21
TTC3-224ENST00000494243 NSA2O95478 260 aaKnown RBP22.59■■□□□ 1.21
TTC3-224ENST00000494243 KCNK10P57789 538 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 RPS15AP62244 130 aaKnown RBP22.59■■□□□ 1.21
TTC3-224ENST00000494243 CSNK1G2P78368 415 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 C1QL3Q5VWW1 255 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 TMEM214Q6NUQ4 689 aaKnown RBP22.59■■□□□ 1.21
TTC3-224ENST00000494243 RELTQ969Z4 430 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 CCDC138Q96M89 665 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.59■■□□□ 1.213e-10■□□□□ 9.4
TTC3-224ENST00000494243 JRKLQ9Y4A0 524 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 MYO9AB2RTY4 2548 aa22.59■■□□□ 1.21
TTC3-224ENST00000494243 IGHV3-20A0A0C4DH32 117 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 A0A1B0GUH1 482 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 OR2W5A6NFC9 320 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 HIBCHQ6NVY1 386 aaPredicted RBP22.58■■□□□ 1.21
TTC3-224ENST00000494243 MBOAT1Q6ZNC8 495 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 LANCL3Q6ZV70 420 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 FJX1Q86VR8 437 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 TICAM1Q8IUC6 712 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.58■■□□□ 1.21
TTC3-224ENST00000494243 C2CD4AQ8NCU7 369 aaPredicted RBP22.58■■□□□ 1.21
TTC3-224ENST00000494243 OR51Q1Q8NH59 317 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 MCOLN3Q8TDD5 553 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 THAP11Q96EK4 314 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 NDNQ99608 321 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 FAM167BQ9BTA0 163 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 IARS2Q9NSE4 1012 aaKnown RBP22.58■■□□□ 1.21
TTC3-224ENST00000494243 STMN3Q9NZ72 180 aa22.58■■□□□ 1.21
TTC3-224ENST00000494243 LCMT2O60294 686 aaKnown RBP22.57■■□□□ 1.2
TTC3-224ENST00000494243 SEC24DO94855 1032 aaPredicted RBP22.57■■□□□ 1.2
TTC3-224ENST00000494243 CYC1P08574 325 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 IL1RNP18510 177 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 GABRB3P28472 473 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 BCL6P41182 706 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 AP2B1P63010 937 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 ABHD17BQ5VST6 288 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 AGTRAPQ6RW13 159 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 CPEB2Q7Z5Q1 589 aaKnown RBP22.57■■□□□ 1.2
TTC3-224ENST00000494243 KCT2Q8NC54 265 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 METTL21AQ8WXB1 218 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 PCBD2Q9H0N5 130 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 ATG10Q9H0Y0 220 aa22.57■■□□□ 1.2
TTC3-224ENST00000494243 TRMT6Q9UJA5 497 aaKnown RBP22.57■■□□□ 1.2
TTC3-224ENST00000494243 FEZF1A0PJY2 475 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 OR5H15A6NDH6 313 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 SGK494L7N484 410 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 UQCRHP07919 91 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 MST1P26927 711 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 XCR1P46094 333 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 SRSF11Q05519 484 aaKnown RBP22.56■■□□□ 1.2
TTC3-224ENST00000494243 ZXDCQ2QGD7 858 aaPredicted RBP22.56■■□□□ 1.2
TTC3-224ENST00000494243 PDSS2Q86YH6 399 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 PPIL6Q8IXY8 311 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 SLC34A3Q8N130 599 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 SGPP1Q9BX95 441 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 PARVBQ9HBI1 364 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 HCN3Q9P1Z3 774 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 ABI3Q9P2A4 366 aa22.56■■□□□ 1.2
TTC3-224ENST00000494243 PRAMEF2O60811 474 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 C8GP07360 202 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 CDKN2DP55273 166 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 ZNF33BQ06732 778 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 NAE1Q13564 534 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 PTK6Q13882 451 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 CRYMQ14894 314 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 PHKG1Q16816 387 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 MINDY4Q4G0A6 757 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 RNASEH2BQ5TBB1 312 aaKnown RBP22.55■■□□□ 1.2
TTC3-224ENST00000494243 PLAG1Q6DJT9 500 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 LRRC8EQ6NSJ5 796 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 UGT3A1Q6NUS8 523 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 H3F3CQ6NXT2 135 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 PAQR3Q6TCH7 311 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 ANKRD37Q7Z713 158 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 PCGF5Q86SE9 256 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 SLC26A11Q86WA9 606 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 C17orf64Q86WR6 236 aa22.55■■□□□ 1.2
TTC3-224ENST00000494243 SCN3AQ9NY46 2000 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 PGRMC1O00264 195 aaKnown RBP22.54■■□□□ 1.2
TTC3-224ENST00000494243 SLC16A5O15375 505 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 WISP2O76076 250 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 RASAL1O95294 804 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 NPPBP16860 134 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 PGAM1P18669 254 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 RGS4P49798 205 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 SP140Q13342 867 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 BTBD16Q32M84 506 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 RBM20Q5T481 1227 aaKnown RBP22.54■■□□□ 1.2
TTC3-224ENST00000494243 MFSD4BQ5TF39 518 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 GFRALQ6UXV0 394 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 CAMKVQ8NCB2 501 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 DNAJB8Q8NHS0 232 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 NAP1L3Q99457 506 aaPredicted RBP22.54■■□□□ 1.2
TTC3-224ENST00000494243 TAS2R13Q9NYV9 303 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 ENTPD4Q9Y227 616 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 CREBBPQ92793 2442 aa22.54■■□□□ 1.2
TTC3-224ENST00000494243 SCN2AQ99250 2005 aa22.53■■□□□ 1.2
TTC3-224ENST00000494243 A8MUI8 341 aa22.53■■□□□ 1.2
TTC3-224ENST00000494243 BANF1O75531 89 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms