RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 NACC2Q96BF6 587 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 THOC3Q96J01 351 aaKnown RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 OR4K3Q96R72 315 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 NAT9Q9BTE0 207 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 SGPP1Q9BX95 441 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 ILKAPQ9H0C8 392 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-219ENST00000494069 SMYD2Q9NRG4 433 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 TMEM184CQ9NVA4 438 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 CDC14AQ9UNH5 594 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 VWA7Q9Y334 891 aa8.1□□□□□ -1.11
LRCH3-219ENST00000494069 LRRK2Q5S007 2527 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 UTP20O75691 2785 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IGHV3-20A0A0C4DH32 117 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 SGK494L7N484 410 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 CDC7O00311 574 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 MAP2K7O14733 419 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 SLC16A5O15375 505 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IPO13O94829 963 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 BMP10O95393 424 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 GUCA1CO95843 209 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 B3GALT4O96024 378 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 HPP00738 406 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ANXA5P08758 320 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 COX6A1P12074 109 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ACPPP15309 386 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IL1RNP18510 177 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ARL4CP56559 192 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 TAS2R39P59534 338 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IL2P60568 153 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 RELAQ04206 551 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 MGAT5Q09328 741 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 NR6A1Q15406 480 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 CATSPEREQ5SY80 951 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 AGAP7PQ5VUJ5 663 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 GARNL3Q5VVW2 1013 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 B3GNTL1Q67FW5 361 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 TMEM214Q6NUQ4 689 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IGFL2Q6UWQ7 119 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 CAPN12Q6ZSI9 719 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 STRA8Q7Z7C7 330 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 SLC26A11Q86WA9 606 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ZC3HC1Q86WB0 502 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 C17orf64Q86WR6 236 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PDSS2Q86YH6 399 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PALM2Q8IXS6 379 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 IQCKQ8N0W5 287 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ZNF740Q8NDX6 193 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 FBXO36Q8NEA4 188 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ZCCHC10Q8TBK6 192 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ANKRD49Q8WVL7 239 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PSMF1Q92530 271 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 MOCOSQ96EN8 888 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 MVB12AQ96EY5 273 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 SNF8Q96H20 258 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 AGAP4Q96P64 663 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 UNKQ9C0B0 810 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 LHPPQ9H008 270 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 DRC3Q9H069 523 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 SPNS1Q9H2V7 528 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 ARL15Q9NXU5 204 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 UTP6Q9NYH9 597 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 PLA2G3Q9NZ20 509 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 HCN3Q9P1Z3 774 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
LRCH3-219ENST00000494069 NOVA2Q9UNW9 492 aaKnown RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 RP1L1Q8IWN7 2480 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-219ENST00000494069 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.12
LRCH3-219ENST00000494069 SCN3AQ9NY46 2000 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CNTRLQ7Z7A1 2325 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 ESPL1Q14674 2120 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 KCNE1BA0A087WTH5 132 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 IGHV1-45A0A0A0MS14 117 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 NSG1A0A0A6YYJ2 146 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 NPEPPSL1A6NEC2 478 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 ZNF860A6NHJ4 632 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CXorf49A8MYA2 514 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 E7ESA3 106 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CCDC188H7C350 402 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 CBX6O95503 412 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 F10P00742 488 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 HEXBP07686 556 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 HIST1H2AGP0C0S8 130 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 PRR35P0CG20 571 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 HIST1H2ADP20671 130 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SSTR1P30872 391 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 PAFAH1B1P43034 410 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 ST13P50502 369 aaKnown RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 RPS15AP62244 130 aaKnown RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 C2orf54Q08AI8 447 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 SP140Q13342 867 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 FAM53BQ14153 422 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 PCOLCEQ15113 449 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 TRADDQ15628 312 aa8.08□□□□□ -1.12
LRCH3-219ENST00000494069 C18orf21Q32NC0 220 aaPredicted RBP8.08□□□□□ -1.12
LRCH3-219ENST00000494069 FHL5Q5TD97 284 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms