RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RHBDF1Q96CC6 855 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 FMO2Q99518 471 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 NINJ2Q9NZG7 142 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 ANAPC2Q9UJX6 822 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 DYRK1BQ9Y463 629 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 PCDHGB7Q9Y5F8 929 aa21.51■■□□□ 1.03
SNIP1-203ENST00000493916 HELZ2Q9BYK8 2649 aaKnown RBP21.51■■□□□ 1.03
SNIP1-203ENST00000493916 TRBC2A0A5B9 178 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 AGPSO00116 658 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 LCMT2O60294 686 aaKnown RBP21.5■■□□□ 1.03
SNIP1-203ENST00000493916 PDGFAP04085 211 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 ZGLP1P0C6A0 271 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 CRABP2P29373 138 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 ECHS1P30084 290 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 SLC6A12P48065 614 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 KLC1Q07866 573 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 CSHL1Q14406 222 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 SLMAPQ14BN4 828 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 ASPGQ86U10 573 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 TCAIMQ8N3R3 496 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 SPATA6LQ8N4H0 392 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 TBC1D19Q8N5T2 526 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 CLEC1AQ8NC01 280 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 IFT81Q8WYA0 676 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 MMABQ96EY8 250 aaPredicted RBP21.5■■□□□ 1.03
SNIP1-203ENST00000493916 TSNARE1Q96NA8 513 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 CYTH2Q99418 400 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 FUT8Q9BYC5 575 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 UNKQ9C0B0 810 aaKnown RBP21.5■■□□□ 1.03
SNIP1-203ENST00000493916 PELI2Q9HAT8 420 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 C14orf105Q9NVL8 296 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 G3BP2Q9UN86 482 aaKnown RBP21.5■■□□□ 1.03
SNIP1-203ENST00000493916 MRPS2Q9Y399 296 aaKnown RBP21.5■■□□□ 1.03
SNIP1-203ENST00000493916 MAP4K5Q9Y4K4 846 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 HS3ST3B1Q9Y662 390 aa21.5■■□□□ 1.03
SNIP1-203ENST00000493916 A0A0A6YYC8 382 aaPredicted RBP21.49■■□□□ 1.03
SNIP1-203ENST00000493916 H0YIG0 161 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 I3L1I5 382 aaPredicted RBP21.49■■□□□ 1.03
SNIP1-203ENST00000493916 SOCS6O14544 535 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 STATHP02808 62 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 SLC35E2BP0CK96 405 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 AVPR1BP47901 424 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 KLRB1Q12918 225 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 OR4D1Q15615 310 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 CATSPEREQ5SY80 951 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 SHISA6Q6ZSJ9 500 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 CMC1Q7Z7K0 106 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 FDCSPQ8NFU4 85 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 SLC13A3Q8WWT9 602 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 KIAA1191Q96A73 305 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 CRB3Q9BUF7 120 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 TGIF2Q9GZN2 237 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 ACSS3Q9H6R3 686 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 MKKSQ9NPJ1 570 aaPredicted RBP21.49■■□□□ 1.03
SNIP1-203ENST00000493916 TRPC4Q9UBN4 977 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 SLC22A14Q9Y267 594 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 KCNE2Q9Y6J6 123 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 NUP210LQ5VU65 1888 aa21.49■■□□□ 1.03
SNIP1-203ENST00000493916 J3QKU1 62 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 NSA2O95478 260 aaKnown RBP21.48■■□□□ 1.03
SNIP1-203ENST00000493916 SLC35G6P0C7Q6 338 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 GGT5P36269 586 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 SOX8P57073 446 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 SNRPNP63162 240 aaKnown RBP21.48■■□□□ 1.03
SNIP1-203ENST00000493916 REEP5Q00765 189 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 MEF2AQ02078 507 aaPredicted RBP21.48■■□□□ 1.03
SNIP1-203ENST00000493916 RBBP7Q16576 425 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 NXPE4Q6UWF7 544 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 CCDC91Q7Z6B0 441 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 GPSM1Q86YR5 675 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 NUDT9Q9BW91 350 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 CDC42EP4Q9H3Q1 356 aaKnown RBP21.48■■□□□ 1.03
SNIP1-203ENST00000493916 FBXL4Q9UKA2 621 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 ZNF451Q9Y4E5 1061 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 ANKRD12Q6UB98 2062 aa21.48■■□□□ 1.03
SNIP1-203ENST00000493916 TENM4Q6N022 2769 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 CCDC88CQ9P219 2028 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 OR1F1O43749 312 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 IPO13O94829 963 aaKnown RBP21.47■■□□□ 1.03
SNIP1-203ENST00000493916 WDR47O94967 919 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 AHRP35869 848 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 CASRP41180 1078 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 SCTRP47872 440 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 CSRP3P50461 194 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 PWP1Q13610 501 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 VWA2Q5GFL6 755 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 UBAP2Q5T6F2 1119 aaKnown RBP21.47■■□□□ 1.03
SNIP1-203ENST00000493916 KIRREL2Q6UWL6 708 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 RAPH1Q70E73 1250 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 HPS6Q86YV9 775 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 PDPRQ8NCN5 879 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 VPS50Q96JG6 964 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 SMAD5Q99717 465 aaKnown RBP21.47■■□□□ 1.03
SNIP1-203ENST00000493916 MACROD1Q9BQ69 325 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 TMEM79Q9BSE2 394 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 SPNS1Q9H2V7 528 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 CNOT10Q9H9A5 744 aaKnown RBP21.47■■□□□ 1.03
SNIP1-203ENST00000493916 GPR83Q9NYM4 423 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 C3orf18Q9UK00 162 aa21.47■■□□□ 1.03
SNIP1-203ENST00000493916 SLC22A7Q9Y694 548 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms