RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TOR4AQ9NXH8 423 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 PSD3Q9NYI0 1048 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 KLHL3Q9UH77 587 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 ATXN7L1Q9ULK2 861 aaPredicted RBP11.92□□□□□ -0.5
SNX17-208ENST00000493711 PLCL2Q9UPR0 1127 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
SNX17-208ENST00000493711 IGHV5-51A0A0C4DH38 117 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 ANKDD1BA6NHY2 528 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 AZIN1O14977 448 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 ULK1O75385 1050 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 KCNK5O95279 499 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 MT-CO3P00414 261 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 HSD3B1P14060 373 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 HSD3B2P26439 372 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 SCTRP47872 440 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 RPL14P50914 215 aaKnown RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 ERVPABLB-1P60509 514 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 INSM1Q01101 510 aaPredicted RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 OCRLQ01968 901 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 EIF3IQ13347 325 aaKnown RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
SNX17-208ENST00000493711 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 MANEAQ5SRI9 462 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 FRG2Q64ET8 278 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 RNF44Q7L0R7 432 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 CRLF3Q8IUI8 442 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 GALNT15Q8N3T1 639 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 DNAJC22Q8N4W6 341 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 MFSD9Q8NBP5 474 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 CCT6BQ92526 530 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 FRG2BQ96QU4 278 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 CMKLR1Q99788 373 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 RHBGQ9H310 441 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 ELOVL6Q9H5J4 265 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 ENAMQ9NRM1 1142 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 NMRK1Q9NWW6 199 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 VTI1BQ9UEU0 232 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 PILRAQ9UKJ1 303 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 PPT2Q9UMR5 302 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 SH2B3Q9UQQ2 575 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 RNF11Q9Y3C5 154 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 TRAF6Q9Y4K3 522 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 AP1M2Q9Y6Q5 423 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
SNX17-208ENST00000493711 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 SPAARA0A1B0GVQ0 90 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 SERTM1A2A2V5 107 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 FOXE1O00358 373 aaPredicted RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 UBFD1O14562 309 aaKnown RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 HAT1O14929 419 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 OR1F1O43749 312 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 OR4F21O95013 312 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 CAPN1P07384 714 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 PVRP15151 417 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 TSPAN8P19075 237 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 GUCY1A3Q02108 690 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 PWP1Q13610 501 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 ZRSR2Q15696 482 aaKnown RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 CPSF6Q16630 551 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNX17-208ENST00000493711 ISXQ2M1V0 245 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 LETMD1Q6P1Q0 360 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 RPS27LQ71UM5 84 aaKnown RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 SLCO6A1Q86UG4 719 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 CDYL2Q8N8U2 506 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 GBP7Q8N8V2 638 aaPredicted RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 DCBLD1Q8N8Z6 715 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 CAMKVQ8NCB2 501 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 OR7G3Q8NG95 312 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 LIN37Q96GY3 246 aaPredicted RBP11.9□□□□□ -0.5
SNX17-208ENST00000493711 CENPKQ9BS16 269 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 TMEM9Q9P0T7 183 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 SERTAD3Q9UJW9 196 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 CLCA2Q9UQC9 943 aa11.9□□□□□ -0.5
SNX17-208ENST00000493711 SPTBN2O15020 2390 aa11.9□□□□□ -0.51
SNX17-208ENST00000493711 URADA6NGE7 173 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 TRPC5OSA6NMA1 111 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 A8MU76 341 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 MANBAO00462 879 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 PPP6CO00743 305 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 POLR3GO15318 223 aaPredicted RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 ZSCAN9O15535 394 aaPredicted RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 ITM2AO43736 263 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 PRAMEF4O60810 478 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CTSVO60911 334 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CLEC3AO75596 197 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CHRNGP07510 517 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 ADRB1P08588 477 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 SLC35G6P0C7Q6 338 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 CD22P20273 847 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 MPSTP25325 297 aa11.89□□□□□ -0.51
SNX17-208ENST00000493711 PTX3P26022 381 aaPredicted RBP11.89□□□□□ -0.51
SNX17-208ENST00000493711 SEPHS1P49903 392 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms