RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RNF31Q96EP0 1072 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CXorf58Q96LI9 332 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GPR137Q96N19 417 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 RHNO1Q9BSD3 238 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 DPH7Q9BTV6 452 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PDGFCQ9NRA1 345 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SNTG1Q9NSN8 517 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SLC9A2Q9UBY0 812 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CD300AQ9UGN4 299 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 UBIAD1Q9Y5Z9 338 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GREB1Q4ZG55 1949 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CENPFP49454 3210 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 KCNK1O00180 336 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GADD45GO95257 159 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SIX6O95475 246 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 RAB3DO95716 219 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ALDOAP04075 364 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CYP17A1P05093 508 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PRKCGP05129 697 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CNPP09543 421 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SUPT20HL2P0C7V6 817 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF8P17098 575 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CD72P21854 359 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MAPK1P28482 360 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 TRHRP34981 398 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 VAMP7P51809 220 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 VSX2P58304 361 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CLDN10P78369 228 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CRADDP78560 199 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 MBTD1Q05BQ5 628 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF33AQ06730 810 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GRM3Q14832 879 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SMN1Q16637 294 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 EIF2S3LQ2VIR3 472 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 VPS26BQ4G0F5 336 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF574Q6ZN55 896 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 GCNT7Q6ZNI0 430 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 TRMT11Q7Z4G4 463 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 PSTKQ8IV42 348 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 NKAIN4Q8IVV8 208 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 FTMTQ8N4E7 242 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CDYL2Q8N8U2 506 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SCRN2Q96FV2 425 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 TCEAL7Q9BRU2 100 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 CNPPD1Q9BV87 410 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 SLC29A3Q9BZD2 475 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 NMRAL1Q9HBL8 299 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 LYARQ9NX58 379 aaKnown RBP6.66□□□□□ -1.34
VPS13B-205ENST00000493587 AUP1Q9Y679 476 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 A3GALT2U3KPV4 340 aa6.66□□□□□ -1.34
VPS13B-205ENST00000493587 A0A096LPK6 155 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 LOC102723532A0A0G2JNH3 316 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 A0A1B0GW55 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 APBB3O95704 486 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 FBP1P09467 338 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L2P0CJ85 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L3P0CJ86 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L4P0CJ87 422 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L5P0CJ88 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L6P0CJ89 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4L7P0CJ90 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 VEGFCP49767 419 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 SULT1E1P49888 294 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 TAS2R60P59551 318 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RAB2AP61019 212 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 BEX3Q00994 111 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 HYAL2Q12891 473 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 PPA1Q15181 289 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 AVPI1Q5T686 147 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 GPR158Q5T848 1215 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 NBPF12Q5TAG4 269 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 FAM171A1Q5VUB5 890 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 ALKAL2Q6UX46 152 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DLK2Q6UY11 383 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 HTR3DQ70Z44 454 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RAB44Q7Z6P3 723 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 ABI3BPQ7Z7G0 1075 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 CCDC190Q86UF4 302 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 LAX1Q8IWV1 398 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RDH10Q8IZV5 341 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF454Q8N9F8 522 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 KCTD6Q8NC69 237 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 WFIKKN2Q8TEU8 576 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RNF34Q969K3 372 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 KIAA1191Q96A73 305 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 NXPE2Q96DL1 559 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 CERS2Q96G23 380 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 ZFP42Q96MM3 310 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RBP7Q96R05 134 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 SDHCQ99643 169 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 AMNQ9BXJ7 453 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 SPRTNQ9H040 489 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 RIMS4Q9H426 269 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-205ENST00000493587 DUX4Q9UBX2 424 aa6.65□□□□□ -1.34
VPS13B-205ENST00000493587 FAM234BA2RU67 622 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 LCHNA4D1U4 455 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 F8VP50 259 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 OGTO15294 1046 aa6.65□□□□□ -1.35
VPS13B-205ENST00000493587 EIF3DO15371 548 aaKnown RBP eCLIP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms