RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 OPTCQ9UBM4 332 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 PTBP2Q9UKA9 531 aaKnown RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 TMCO1Q9UM00 188 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 TMEM184BQ9Y519 407 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 ASB1Q9Y576 335 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 ANGPTL3Q9Y5C1 460 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 KCNE2Q9Y6J6 123 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 SCN2AQ99250 2005 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 SEC16AO15027 2179 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 NBPF19A0A087WUL8 3843 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 LOC105369274A0A096LPK9 316 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 LOC102723532A0A0G2JNH3 316 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 FEZF1A0PJY2 475 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 H0YGG7 62 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 COPEO14579 308 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 MAP2K7O14733 419 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 CLGNO14967 610 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 ZNF749O43361 778 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 STATHP02808 62 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 GSTA1P08263 222 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 GNAZP19086 355 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 GGT5P36269 586 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 ALDH18A1P54886 795 aaKnown RBP11.07□□□□□ -0.64
CTSA-209ENST00000493522 ARF3P61204 181 aaPredicted RBP11.07□□□□□ -0.64
CTSA-209ENST00000493522 RPS15AP62244 130 aaKnown RBP11.07□□□□□ -0.64
CTSA-209ENST00000493522 REEP5Q00765 189 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 KCNAB2Q13303 367 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TCTE1Q5JU00 501 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 CEP85LQ5SZL2 805 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 C16orf46Q6P387 395 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TLDC1Q6P9B6 456 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
CTSA-209ENST00000493522 CACNA2D3Q8IZS8 1091 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 NLGN4XQ8N0W4 816 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 OR4N4Q8N0Y3 316 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TBC1D19Q8N5T2 526 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 ESX1Q8N693 406 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 CSNK1A1LQ8N752 337 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 NLGN4YQ8NFZ3 816 aaPredicted RBP11.07□□□□□ -0.64
CTSA-209ENST00000493522 NKD1Q969G9 470 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 ZBTB9Q96C00 473 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 NDC1Q9BTX1 674 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 CD244Q9BZW8 370 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 PELI2Q9HAT8 420 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TXLNGQ9NUQ3 528 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 GPRC5BQ9NZH0 403 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 DCDC2Q9UHG0 476 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TUBD1Q9UJT1 453 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 PILRAQ9UKJ1 303 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 SRPK3Q9UPE1 567 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 PCDHB3Q9Y5E6 796 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 AP1M2Q9Y6Q5 423 aa11.07□□□□□ -0.64
CTSA-209ENST00000493522 TRBC2A0A5B9 178 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 K7EPI3 171 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 RGS16O15492 202 aaPredicted RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 CTIFO43310 598 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 KLK8O60259 260 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 SRPX2O60687 465 aaPredicted RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 HBQ1P09105 142 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 KRT4P19013 534 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 TAC1P20366 129 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 EEF1DP29692 281 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 BCL6P41182 706 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 CCR10P46092 362 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 POLE2P56282 527 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 GPS2Q13227 327 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 MAP7Q14244 749 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 SLBPQ14493 270 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTSA-209ENST00000493522 GRM7Q14831 915 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 WASHC2DQ5SRD0 308 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 NXPE4Q6UWF7 544 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 TIPARPQ7Z3E1 657 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 TRABD2AQ86V40 505 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 SRRM1Q8IYB3 904 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 TEX9Q8N6V9 391 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 ABHD11Q8NFV4 315 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 MR1Q95460 341 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 PHF21BQ96EK2 531 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 APOPT1Q96IL0 206 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 CATSPER2Q96P56 530 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 RUFY1Q96T51 708 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 AIF1LQ9BQI0 150 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 TMEM109Q9BVC6 243 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 NLNQ9BYT8 704 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 IQCGQ9H095 443 aaKnown RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 SPNS1Q9H2V7 528 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 SYNPO2LQ9H987 977 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
CTSA-209ENST00000493522 NDOR1Q9UHB4 597 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
CTSA-209ENST00000493522 LRRC14BA6NHZ5 514 aa11.05□□□□□ -0.64
CTSA-209ENST00000493522 ZNF891A8MT65 544 aaPredicted RBP11.05□□□□□ -0.64
CTSA-209ENST00000493522 A8MT66 165 aa11.05□□□□□ -0.64
CTSA-209ENST00000493522 H3BMH7 237 aa11.05□□□□□ -0.64
CTSA-209ENST00000493522 STX16-NPEPL1H3BU86 382 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms