RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NEURL1O76050 574 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 CATP04040 527 aaKnown RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 IGFBP2P18065 325 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 XCR1P46094 333 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 TAS2R50P59544 299 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 OC90Q02509 493 aaPredicted RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 RNF187Q5TA31 235 aaPredicted RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 SLC25A25Q6KCM7 469 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 CHERPQ8IWX8 916 aaKnown RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 OR51Q1Q8NH59 317 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 PANX2Q96RD6 677 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 OLFM1Q99784 485 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 CHRAC1Q9NRG0 131 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 LRFN1Q9P244 771 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 TSR3Q9UJK0 312 aaKnown RBP16.65■□□□□ 0.26
NUP50-218ENST00000493456 HEATR5BQ9P2D3 2071 aa16.65■□□□□ 0.26
NUP50-218ENST00000493456 PFDN6O15212 129 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 KIF5CO60282 957 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 ART1P52961 327 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 HSF1Q00613 529 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 PAPD4Q6PIY7 484 aaKnown RBP16.64■□□□□ 0.25
NUP50-218ENST00000493456 C3P1Q6ZMU1 363 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 OTUD6BQ8N6M0 293 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 BIRC8Q96P09 236 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 PKP4Q99569 1192 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 LPAR4Q99677 370 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 TREX1Q9NSU2 369 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 ASB1Q9Y576 335 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 DUSP10Q9Y6W6 482 aa16.64■□□□□ 0.25
NUP50-218ENST00000493456 GRID2IPA4D2P6 1211 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 MIF4GDA9UHW6 222 aaKnown RBP16.63■□□□□ 0.25
NUP50-218ENST00000493456 E7ENX8 843 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 SMAPO00193 183 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 NME2P1O60361 137 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 MAN1A2O60476 641 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 SLC25A12O75746 678 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 IPO7O95373 1038 aaKnown RBP16.63■□□□□ 0.25
NUP50-218ENST00000493456 SLC16A8O95907 504 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 IFNB1P01574 187 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 ESR1P03372 595 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 APRTP07741 180 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 NME2P22392 152 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 ADARP55265 1226 aaKnown RBP16.63■□□□□ 0.25
NUP50-218ENST00000493456 RPS15AP62244 130 aaKnown RBP16.63■□□□□ 0.25
NUP50-218ENST00000493456 TAP2Q03519 686 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
NUP50-218ENST00000493456 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 ZNF480Q8WV37 535 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 ASB5Q8WWX0 329 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 LPGAT1Q92604 370 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 RAB6BQ9NRW1 208 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 HCN3Q9P1Z3 774 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 TNFRSF10DQ9UBN6 386 aa16.63■□□□□ 0.25
NUP50-218ENST00000493456 SPG11Q96JI7 2443 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 VPS13CQ709C8 3753 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 NIPSNAP2O75323 286 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 CHRM3P20309 590 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 HRH2P25021 359 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 FMO4P31512 558 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 BCL6P41182 706 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 ACTN3Q08043 901 aaPredicted RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 USP10Q14694 798 aaKnown RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 MAPKAPK3Q16644 382 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 TYSND1Q2T9J0 566 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 KLHL38Q2WGJ6 581 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 SFT2D3Q587I9 215 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 MEI1Q5TIA1 1274 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 TMEM214Q6NUQ4 689 aaKnown RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 PRSS41Q7RTY9 318 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 SDCCAG8Q86SQ7 713 aaPredicted RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 PLD3Q8IV08 490 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 POGLUT1Q8NBL1 392 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 FBXO15Q8NCQ5 510 aaPredicted RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 PPFIBP2Q8ND30 876 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 ATG4AQ8WYN0 398 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 TCF12Q99081 682 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
NUP50-218ENST00000493456 IL22Q9GZX6 179 aa16.62■□□□□ 0.25
NUP50-218ENST00000493456 GTF3C1Q12789 2109 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 KCNE1BA0A087WTH5 132 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 FAM221AA4D161 298 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 NDC80O14777 642 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 ZNHIT1O43257 154 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 LIASO43766 372 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 NADKO95544 446 aaPredicted RBP16.61■□□□□ 0.25
NUP50-218ENST00000493456 IL1RNP18510 177 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 IL10P22301 178 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 CHRNB4P30926 498 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 ST13P50502 369 aaKnown RBP16.61■□□□□ 0.25
NUP50-218ENST00000493456 SNRPNP63162 240 aaKnown RBP16.61■□□□□ 0.25
NUP50-218ENST00000493456 ABRAXAS2Q15018 415 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 NSDHLQ15738 373 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 ACSBG2Q5FVE4 666 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 RNFT1Q5M7Z0 435 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 THEMIS2Q5TEJ8 643 aa16.61■□□□□ 0.25
NUP50-218ENST00000493456 TMEM211Q6ICI0 200 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms