RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 BDKRB1P46663 353 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 CCT5P48643 541 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 HNMTP50135 292 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TIAL1Q01085 375 aaKnown RBP eCLIP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 NAA25Q14CX7 972 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 EFTUD2Q15029 972 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■□□ 18.1
TMEM39A-211ENST00000491685 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 SLC5A12Q1EHB4 618 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TSNAXIP1Q2TAA8 658 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 CCSMST1Q4G0I0 132 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 FCRL6Q6DN72 434 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 MED25Q71SY5 747 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 COX15Q7KZN9 410 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 PIWIL4Q7Z3Z4 852 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ADAMTSL2Q86TH1 951 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 GPSM1Q86YR5 675 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TCAIMQ8N3R3 496 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 GOLGA6L1Q8N7Z2 621 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TMEM102Q8N9M5 508 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 OR2L8Q8NGY9 312 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 GIMAP7Q8NHV1 300 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 PROKR1Q8TCW9 393 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ACMSDQ8TDX5 336 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 C19orf60Q96EN9 201 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 VPS50Q96JG6 964 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 UBXN10Q96LJ8 280 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 SMAD5Q99717 465 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 CHRNA10Q9GZZ6 450 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 PCBD2Q9H0N5 130 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ZBTB20Q9HC78 741 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 CELSR2Q9HCU4 2923 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 SNX15Q9NRS6 342 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 INTS7Q9NVH2 962 aaKnown RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 ARL15Q9NXU5 204 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 TBK1Q9UHD2 729 aa10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 GPN3Q9UHW5 284 aaPredicted RBP10.54□□□□□ -0.72
TMEM39A-211ENST00000491685 MAP2K7O14733 419 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 DPM1O60762 260 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 KLHL2O95198 593 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CCNDBP1O95273 360 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 MED26O95402 600 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 ALPPP05187 535 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 MYZAPP0CAP1 466 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PSMB5P28074 263 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 FOLR3P41439 243 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PNLIPRP1P54315 467 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CDKL1Q00532 357 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 BMPR2Q13873 1038 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 SF1Q15637 639 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CDKL4Q5MAI5 379 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 DCAF10Q5QP82 559 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 THEMIS2Q5TEJ8 643 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 IQCKQ8N0W5 287 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 OR2Y1Q8NGV0 311 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 SMPDL3AQ92484 453 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 TM9SF4Q92544 642 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 DLG3Q92796 817 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 KIAA1191Q96A73 305 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 SCYL1Q96KG9 808 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 FER1L6-AS2Q96M78 137 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PKP4Q99569 1192 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 MIPEPQ99797 713 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 EGFL8Q99944 293 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 MESP1Q9BRJ9 268 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 STMN4Q9H169 189 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CNOT10Q9H9A5 744 aaKnown RBP10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 TXLNGQ9NUQ3 528 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 IRAK4Q9NWZ3 460 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 P4HTMQ9NXG6 502 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 EURLQ9NYK6 297 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 IFT80Q9P2H3 777 aaPredicted RBP10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 NDOR1Q9UHB4 597 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 RNF112Q9ULX5 631 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 TMCO1Q9UM00 188 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PLCL2Q9UPR0 1127 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 PDE10AQ9Y233 779 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 CSAG2Q9Y5P2 127 aa10.53□□□□□ -0.72
TMEM39A-211ENST00000491685 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 SMIM23A6NLE4 172 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 ARHGEF33A8MVX0 844 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 MYO1CO00159 1063 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 PEX12O00623 359 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 IPO13O94829 963 aaKnown RBP10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 AGFG2O95081 481 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 GUCA1CO95843 209 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 SHBGP04278 402 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 CD1DP15813 335 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 HRH2P25021 359 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 CMPK1P30085 196 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 RPA3P35244 121 aaPredicted RBP10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 GRIA3P42263 894 aa10.52□□□□□ -0.73
TMEM39A-211ENST00000491685 SLCO1A2P46721 670 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms