RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GPAMQ9HCL2 828 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 GPR83Q9NYM4 423 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 LUZP4Q9P127 313 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 SH2B3Q9UQQ2 575 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF451Q9Y4E5 1061 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 MAU2Q9Y6X3 613 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 DOCK10Q96BY6 2186 aa12.1□□□□□ -0.47
SEC61A1-206ENST00000491668 PABPN1LA6NDY0 278 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 TRIM49D1C9J1S8 452 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 CDH16O75309 829 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 TSPAN12O95859 305 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ALBP02768 609 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 EIF2S1P05198 315 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ENO3P13929 434 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 KRT15P19012 456 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 FDXRP22570 491 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MMP11P24347 488 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 IMPA1P29218 277 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 CRABP2P29373 138 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 CMPK1P30085 196 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 HSD17B2P37059 387 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 UQCRFS1P47985 274 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 RAB10P61026 200 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF460Q14592 562 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 HKDC1Q2TB90 917 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 FAM214AQ32MH5 1076 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 SLC6A19Q695T7 634 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 PAQR3Q6TCH7 311 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MBOAT1Q6ZNC8 495 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MYO1HQ8N1T3 1032 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 NKAPQ8N5F7 415 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 EPS8L3Q8TE67 593 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 EEF1AKMT1Q8WVE0 214 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 IP6K3Q96PC2 410 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MCMBPQ9BTE3 642 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ROPN1BQ9BZX4 212 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 CENPHQ9H3R5 247 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 SOX17Q9H6I2 414 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 ROPN1Q9HAT0 212 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 POPDC3Q9HBV1 291 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MRPS30Q9NP92 439 aaKnown RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 CUEDC1Q9NWM3 386 aaPredicted RBP12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 FBXL4Q9UKA2 621 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 MAP4K5Q9Y4K4 846 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
SEC61A1-206ENST00000491668 IGLV3-12A0A075B6K2 115 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 GOLGA6L10A6NI86 522 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 AGPSO00116 658 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PEX12O00623 359 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 P2RX6O15547 441 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PHGDHO43175 533 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CD63P08962 238 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 H2AFXP16104 143 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 GCAP28676 217 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 EFNA3P52797 238 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 Q0VFX4 171 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 TSTA3Q13630 321 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CASP8Q14790 479 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 MYBPC3Q14896 1274 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PHKG1Q16816 387 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 KRT71Q3SY84 523 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PLEKHN1Q494U1 663 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 VWA5B1Q5TIE3 1220 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CMC1Q7Z7K0 106 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CROCCP2Q86T23 111 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 LAPTM4BQ86VI4 370 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 TDRPQ86YL5 185 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PLD3Q8IV08 490 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CEP97Q8IW35 865 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 RIBC1Q8N443 379 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 AMER2Q8N7J2 671 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 TTC29Q8NA56 475 aaPredicted RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 VPS11Q9H270 941 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 SNX15Q9NRS6 342 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 PDE10AQ9Y233 779 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 MRPS2Q9Y399 296 aaKnown RBP12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CNTRLQ7Z7A1 2325 aa12.08□□□□□ -0.48
SEC61A1-206ENST00000491668 CENPEQ02224 2701 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 A0A087X1B8 175 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 EIF3FO00303 357 aaPredicted RBP12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 FFAR3O14843 346 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 HAT1O14929 419 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 GPR42O15529 346 aa12.07□□□□□ -0.48
SEC61A1-206ENST00000491668 FOXS1O43638 330 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms