RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TTLL8A6PVC2 850 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 CXorf49A8MYA2 514 aaPredicted RBP14.33□□□□□ -0.12
USP39-217ENST00000491659 FFAR3O14843 346 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 GPR42O15529 346 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 FOXS1O43638 330 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 ALOX12BO75342 701 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 NPPBP16860 134 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 GP5P40197 560 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 MAGEA4P43358 317 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 SOX8P57073 446 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 FOXK1P85037 733 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 CDKL1Q00532 357 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 USP10Q14694 798 aaKnown RBP14.33□□□□□ -0.12
USP39-217ENST00000491659 KIRREL2Q6UWL6 708 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 ZDHHC24Q6UX98 284 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 CYS1Q717R9 158 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 ARHGEF39Q8N4T4 335 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 AMER3Q8N944 861 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 MFSD9Q8NBP5 474 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 ABHD11Q8NFV4 315 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 ZCCHC10Q8TBK6 192 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 SLC5A11Q8WWX8 675 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 TM9SF4Q92544 642 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 TRIM44Q96DX7 344 aaPredicted RBP14.33□□□□□ -0.12
USP39-217ENST00000491659 MCMBPQ9BTE3 642 aa14.33□□□□□ -0.12
USP39-217ENST00000491659 MTO1Q9Y2Z2 717 aaKnown RBP14.33□□□□□ -0.12
USP39-217ENST00000491659 IDSB3KWA1 339 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 H0YIG0 161 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 MASP2O00187 686 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 NSA2O95478 260 aaKnown RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 HEXBP07686 556 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 STMN1P16949 149 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 CXCR2P25025 360 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 SPRP35270 261 aaPredicted RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 HNMTP50135 292 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 EMP2P54851 167 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 MLLT10P55197 1068 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 GPX6P59796 221 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 MEF2AQ02078 507 aaPredicted RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 CSHL1Q14406 222 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 TSNQ15631 228 aaKnown RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 ZXDCQ2QGD7 858 aaPredicted RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 TMEM214Q6NUQ4 689 aaKnown RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 JMJD6Q6NYC1 403 aaPredicted RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 ATCAYQ86WG3 371 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 OR9A4Q8NGU2 314 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 ANKRD49Q8WVL7 239 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 SLC13A3Q8WWT9 602 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 ZNF592Q92610 1267 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 TM4SF19Q96DZ7 209 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 TSNARE1Q96NA8 513 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 OR4K3Q96R72 315 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 GPR22Q99680 433 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 TGIF2Q9GZN2 237 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 DERL2Q9GZP9 239 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 ZNF552Q9H707 407 aaPredicted RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 CAB39LQ9H9S4 337 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 ANKHQ9HCJ1 492 aa14.32□□□□□ -0.12
USP39-217ENST00000491659 MRPS2Q9Y399 296 aaKnown RBP14.32□□□□□ -0.12
USP39-217ENST00000491659 TRBC2A0A5B9 178 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 ESYT3A0FGR9 886 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 PCDH17O14917 1159 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 PHGDHO43175 533 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 NDUFS4O43181 175 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 OR1F1O43749 312 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 SORBS2O94875 1100 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 HPP00738 406 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 IL1RNP18510 177 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 MAT1AQ00266 395 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 SLC7A5Q01650 507 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 NAB1Q13506 487 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 TRADDQ15628 312 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 IGFBP7Q16270 282 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 SYT16Q17RD7 645 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 KBTBD12Q3ZCT8 623 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 GRTP1Q5TC63 336 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 SLC6A19Q695T7 634 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 TMPRSS11BQ86T26 416 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 THOC6Q86W42 341 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 ZC3H7AQ8IWR0 971 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
USP39-217ENST00000491659 PPM1NQ8N819 430 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 OR4K1Q8NGD4 311 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 NEIL2Q969S2 332 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 PNPLA2Q96AD5 504 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 MIB2Q96AX9 1013 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 C8orf44Q96CB5 159 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 MACROD1Q9BQ69 325 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 LRRC1Q9BTT6 524 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 SARGQ9BW04 601 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 PELI2Q9HAT8 420 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 SLAMF7Q9NQ25 335 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 KCNE2Q9Y6J6 123 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 MYO18BQ8IUG5 2567 aa14.31□□□□□ -0.12
USP39-217ENST00000491659 DOCK10Q96BY6 2186 aa14.3□□□□□ -0.12
USP39-217ENST00000491659 UBR5O95071 2799 aaPredicted RBP14.3□□□□□ -0.12
USP39-217ENST00000491659 NSG1A0A0A6YYJ2 146 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms