RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 UBAP2Q5T6F2 1119 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 FAM180AQ6UWF9 173 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 CYS1Q717R9 158 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 COX15Q7KZN9 410 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 PIWIL4Q7Z3Z4 852 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 ZC3HC1Q86WB0 502 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 ZGRF1Q86YA3 2104 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 FAM20CQ8IXL6 584 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 KBTBD2Q8IY47 623 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 CPNE9Q8IYJ1 553 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 SLC34A3Q8N130 599 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 FBXO15Q8NCQ5 510 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 OR11G2Q8NGC1 345 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 STT3BQ8TCJ2 826 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 ASB11Q8WXH4 323 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 CABS1Q96KC9 395 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 OLFM1Q99784 485 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 PLCD4Q9BRC7 762 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 DPH7Q9BTV6 452 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 FAM129AQ9BZQ8 928 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 SOX17Q9H6I2 414 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 MKKSQ9NPJ1 570 aaPredicted RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 RIC8BQ9NVN3 520 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 TAS2R13Q9NYV9 303 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 TRMT6Q9UJA5 497 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 C3orf18Q9UK00 162 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 NOVA2Q9UNW9 492 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 KLHL20Q9Y2M5 609 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 MTO1Q9Y2Z2 717 aaKnown RBP9.87□□□□□ -0.83
TTC28-207ENST00000490475 CENPEQ02224 2701 aa9.87□□□□□ -0.83
TTC28-207ENST00000490475 UTP20O75691 2785 aaKnown RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 NSG1A0A0A6YYJ2 146 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 A0A0J9YVX5 310 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 A0A1W2PQ72 361 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 FAM159BA6NKW6 160 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 ARHGEF33A8MVX0 844 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 ZBTB14O43829 449 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 LDLRP01130 860 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 C1QAP02745 245 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 EIF2S1P05198 315 aaKnown RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 CTSBP07858 339 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 GSTA2P09210 222 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 EDN3P14138 238 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 ECHS1P30084 290 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 OR1D4P47884 311 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 CACNA1DQ01668 2161 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 PRDX1Q06830 199 aaKnown RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 KLC1Q07866 573 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 CDC16Q13042 620 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 FAM53BQ14153 422 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 NAA30Q147X3 362 aaPredicted RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 KBTBD12Q3ZCT8 623 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 UGT3A1Q6NUS8 523 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 TMEM207Q6UWW9 146 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 NDUFAF7Q7L592 441 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 CUZD1Q86UP6 607 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 SLC26A11Q86WA9 606 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 BCORP1Q8N888 145 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 MCOLN3Q8TDD5 553 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 FBF1Q8TES7 1133 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 FAR1Q8WVX9 515 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 C19orf60Q96EN9 201 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 THOC3Q96J01 351 aaKnown RBP9.86□□□□□ -0.83
TTC28-207ENST00000490475 PKP4Q99569 1192 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 MCMBPQ9BTE3 642 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 PHACTR1Q9C0D0 580 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 TGIF2Q9GZN2 237 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 PCBD2Q9H0N5 130 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 ACBD3Q9H3P7 528 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 CTSFQ9UBX1 484 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 TEKT2Q9UIF3 430 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 RAB21Q9UL25 225 aa9.86□□□□□ -0.83
TTC28-207ENST00000490475 PCSK5Q92824 1860 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 MYO9AB2RTY4 2548 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 TRAV17A0A0B4J275 112 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 A0A1B0GUH1 482 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 FAM95CA0A1B0GW59 222 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 A0A1W2PPV9 198 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 H0YGG7 62 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 GFYI3L273 518 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 FAM155BO75949 473 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 BMP10O95393 424 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 TSPAN12O95859 305 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 SERPINA7P05543 415 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 MPC1LP0DKB6 136 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 PSMB5P28074 263 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 PNLIPRP1P54315 467 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 EMP2P54851 167 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 TAS2R39P59534 338 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 ARF3P61204 181 aaPredicted RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 FASTKQ14296 549 aaKnown RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.85□□□□□ -0.83
TTC28-207ENST00000490475 ICE2Q659A1 982 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 ATG9BQ674R7 924 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 FRMPD2BQ6IN97 320 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms