RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SLC13A3Q8WWT9 602 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 AGAP4Q96P64 663 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 CPNE1Q99829 537 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 PHACTR1Q9C0D0 580 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 TGIF2Q9GZN2 237 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 LHPPQ9H008 270 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 ILKAPQ9H0C8 392 aaPredicted RBP16.57■□□□□ 0.24
SEC13-218ENST00000490283 EPS8L2Q9H6S3 715 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 SYNPO2LQ9H987 977 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 GRHL1Q9NZI5 618 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 CTNNAL1Q9UBT7 734 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 SH2B3Q9UQQ2 575 aa16.57■□□□□ 0.24
SEC13-218ENST00000490283 NSG1A0A0A6YYJ2 146 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 MASP2O00187 686 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 FFAR3O14843 346 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 GPR42O15529 346 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ALOX12BO75342 701 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
SEC13-218ENST00000490283 UQCRHP07919 91 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 BCL6P41182 706 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 HNMTP50135 292 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 SKP1P63208 163 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ZNF460Q14592 562 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 MFSD4BQ5TF39 518 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 SBSNQ6UWP8 590 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 TMEM207Q6UWW9 146 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 IGFL3Q6UXB1 125 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 C3orf62Q6ZUJ4 267 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 VN1R4Q7Z5H5 301 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 CTAGE3PQ8IX95 158 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 IQCKQ8N0W5 287 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ARHGEF39Q8N4T4 335 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 MFSD9Q8NBP5 474 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ABHD11Q8NFV4 315 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 OR9A4Q8NGU2 314 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ZCCHC10Q8TBK6 192 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 SLC5A11Q8WWX8 675 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 METTL21AQ8WXB1 218 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 THOC3Q96J01 351 aaKnown RBP16.56■□□□□ 0.24
SEC13-218ENST00000490283 SLC29A3Q9BZD2 475 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 ZNF160Q9HCG1 818 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 LUZP4Q9P127 313 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 MKL2Q9ULH7 1088 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 B3GNT3Q9Y2A9 372 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 OARD1Q9Y530 152 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 KCNE2Q9Y6J6 123 aa16.56■□□□□ 0.24
SEC13-218ENST00000490283 MED13Q9UHV7 2174 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 PCM1Q15154 2024 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 TCRBV9S1A1TA0A576 114 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 TRBC2A0A5B9 178 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 CDC7O00311 574 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 OR1F1O43749 312 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 GP5P40197 560 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 CD97P48960 835 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 AP2B1P63010 937 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 CDKL1Q00532 357 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 RGS1Q08116 209 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 USP10Q14694 798 aaKnown RBP16.55■□□□□ 0.24
SEC13-218ENST00000490283 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 TMEM214Q6NUQ4 689 aaKnown RBP16.55■□□□□ 0.24
SEC13-218ENST00000490283 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 CYS1Q717R9 158 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 NDUFAF7Q7L592 441 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 ZNF572Q7Z3I7 529 aaPredicted RBP16.55■□□□□ 0.24
SEC13-218ENST00000490283 KBTBD2Q8IY47 623 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 C8orf44Q96CB5 159 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 RIC8BQ9NVN3 520 aa16.55■□□□□ 0.24
SEC13-218ENST00000490283 NDUFS4O43181 175 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 SERPIND1P05546 499 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 STMN1P16949 149 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 IL1RNP18510 177 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 STX2P32856 288 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 SPRP35270 261 aaPredicted RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 MAT1AQ00266 395 aaKnown RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 MEF2AQ02078 507 aaPredicted RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 HERC3Q15034 1050 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 TSNQ15631 228 aaKnown RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 INPP5JQ15735 1006 aaPredicted RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 MINDY4Q4G0A6 757 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 ATG9BQ674R7 924 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 FAAH2Q6GMR7 532 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 NIPAL1Q6NVV3 410 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 LAPTM4BQ86VI4 370 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 THOC6Q86W42 341 aaKnown RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 CEP97Q8IW35 865 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 ZC3H7AQ8IWR0 971 aaKnown RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 FBXO25Q8TCJ0 367 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 TM4SF19Q96DZ7 209 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 C16orf45Q96MC5 204 aaPredicted RBP16.54■□□□□ 0.24
SEC13-218ENST00000490283 TSNARE1Q96NA8 513 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 OR4K3Q96R72 315 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 RBBP8Q99708 897 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 MACROD1Q9BQ69 325 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 AIF1LQ9BQI0 150 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 DERL2Q9GZP9 239 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 PELI2Q9HAT8 420 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
SEC13-218ENST00000490283 C19orf25Q9UFG5 118 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms