RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SNAPC5O75971 98 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 LGI1O95970 557 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 LALBAP00709 142 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HLA-DQB1P01920 261 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 IFNA4P05014 189 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FABP1P07148 127 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ACRP10323 421 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PRKAR1AP10644 381 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NCF1P14598 390 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ARSBP15848 533 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CTPS1P17812 591 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PFKLP17858 780 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SAT1P21673 171 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NME2P22392 152 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 KCNA5P22460 613 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 YWHABP31946 246 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CLCN3P51790 818 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CLCN5P51795 746 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 POLR2JP52435 117 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 BCAT1P54687 386 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 EPHA5P54756 1037 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RPS8P62241 208 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 UBXN2AP68543 259 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RPP38P78345 283 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP4F8P98187 520 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HOXC5Q00444 222 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RPA4Q13156 261 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RCAN2Q14206 197 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GRB7Q14451 532 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 FGFBP1Q14512 234 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 VEPH1Q14D04 833 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 EIF4HQ15056 248 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PTCHD3Q3KNS1 767 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CYP27C1Q4G0S4 372 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SOWAHCQ53LP3 525 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 XP32Q5T750 250 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLFN12LQ6IEE8 588 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ENPP6Q6UWR7 440 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RTL4Q6ZR62 310 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 EIF3MQ7L2H7 374 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF367Q7RTV3 350 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR155Q7Z3F1 870 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 KRT77Q7Z794 578 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 DDX53Q86TM3 631 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PHYKPLQ8IUZ5 450 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC41A1Q8IVJ1 513 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 C4orf19Q8IY42 314 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 EIF4E3Q8N5X7 224 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 TTC29Q8NA56 475 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 LPCAT1Q8NF37 534 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CLHC1Q8NHS4 586 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 HEXDCQ8WVB3 486 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC13A3Q8WWT9 602 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PIGBQ92521 554 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RHBDF1Q96CC6 855 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 L3HYPDHQ96EM0 354 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 C10orf90Q96M02 699 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RBP7Q96R05 134 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MNTQ99583 582 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PITX2Q99697 317 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PIP5K1AQ99755 562 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 P2RY13Q9BPV8 354 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 MRPL4Q9BYD3 311 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 TRIM8Q9BZR9 551 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF436Q9C0F3 470 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 GSTO2Q9H4Y5 243 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 C8orf33Q9H7E9 229 aaPredicted RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NT5DC2Q9H857 520 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZFP64Q9NPA5 681 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CASS4Q9NQ75 786 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RGS18Q9NS28 235 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 PIH1D1Q9NWS0 290 aaKnown RBP4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 COPZ2Q9P299 210 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 CTSFQ9UBX1 484 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 AASSQ9UDR5 926 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 NDRG3Q9UGV2 375 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF112Q9UJU3 913 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 ABCG2Q9UNQ0 655 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 INVSQ9Y283 1065 aa4.62□□□□□ -1.67
SNRNP40-206ENST00000489853 RGPD3A6NKT7 1758 aaPredicted RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 RGPD4Q7Z3J3 1758 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ZNF541Q9H0D2 1346 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FOCADQ5VW36 1801 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 SLX4Q8IY92 1834 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A096LPI6 279 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM240BA0A1B0GVZ2 78 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM234BA2RU67 622 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ERI2A8K979 691 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 HNRNPCL2B2RXH8 293 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 INMT-MINDY4F8WBC2 141 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 K7ERI5 159 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 ARNTLO00327 626 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 UBFD1O14562 309 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 NUPL2O15504 423 aaKnown RBP4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 B3GALT4O96024 378 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 MT-CO1P00395 513 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 C1RP00736 705 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 EPOP01588 193 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 TSPAN19P0C672 248 aa4.61□□□□□ -1.67
SNRNP40-206ENST00000489853 OR56A5P0C7T3 313 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms