RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NLRP14Q86W24 1093 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CCDC50Q8IVM0 306 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CCDC116Q8IYX3 515 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF611Q8N823 705 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 TNIP2Q8NFZ5 429 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ELOA3Q8NG57 546 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 STT3BQ8TCJ2 826 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 MRAPQ8TCY5 172 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ASB11Q8WXH4 323 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ALG3Q92685 438 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 DLG3Q92796 817 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 MAGOHBQ96A72 148 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 MSI2Q96DH6 328 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 QRFPRQ96P65 431 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 TIMM29Q9BSF4 260 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 CNPPD1Q9BV87 410 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 FAM129AQ9BZQ8 928 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 BHLHE41Q9C0J9 482 aaPredicted RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 KLC2Q9H0B6 622 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 DDX47Q9H0S4 455 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 WDCPQ9H6R7 721 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 SYNCQ9H7C4 482 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 ST7Q9NRC1 585 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PPARGC1AQ9UBK2 798 aaKnown RBP6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 NDRG3Q9UGV2 375 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 KIAA1257Q9ULG3 409 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 NFU1Q9UMS0 254 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PCDHGC3Q9UN70 934 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 LAMP3Q9UQV4 416 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 PLCE1Q9P212 2302 aa6.98□□□□□ -1.29
EXOSC3-206ENST00000489414 A0A1B0GVC2 190 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 GOLGA8KD6RF30 607 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 CHUKO15111 745 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 RAMP2O60895 175 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 GAS8O95995 478 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 CYP2A6P11509 494 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MTHFD1P11586 935 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 GABRA1P14867 456 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MMP8P22894 467 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 CXCR2P25025 360 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 BRD2P25440 801 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 FMO4P31512 558 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 HALP42357 657 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 CSNK1DP48730 415 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 FNTAP49354 379 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 LOXL3P58215 753 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 LGALS3BPQ08380 585 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 PTP4A2Q12974 167 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 PRKAA1Q13131 559 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 PIGHQ14442 188 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 HADHQ16836 314 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF468Q5VIY5 522 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 SYDE1Q6ZW31 735 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 ZNF771Q7L3S4 317 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 SRLQ86TD4 932 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 SULF2Q8IWU5 870 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 GSPT2Q8IYD1 628 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 PRSS58Q8IYP2 241 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MREGQ8N565 214 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 MBD3L2Q8NHZ7 208 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 GRK7Q8WTQ7 553 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 KRT35Q92764 455 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 NTNG2Q96CW9 530 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 RBM41Q96IZ5 413 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 BTBD6Q96KE9 485 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 RIOK2Q9BVS4 552 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 RBM24Q9BX46 236 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 ZDHHC11Q9H8X9 412 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 UNKLQ9H9P5 680 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 DDX56Q9NY93 547 aaKnown RBP6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 AMACRQ9UHK6 382 aa6.97□□□□□ -1.29
EXOSC3-206ENST00000489414 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 GPR89AB7ZAQ6 455 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 NDC80O14777 642 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 NDUFS7O75251 213 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CALCAP01258 141 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 IGHG3P01860 377 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 FREM3P0C091 2139 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 GPR89BP0CG08 455 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CDH5P33151 784 aaPredicted RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CDKN1AP38936 164 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ACADSBP45954 432 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 GSK3AP49840 483 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 MRPS25P82663 173 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CALCOCO2Q13137 446 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 MAMLD1Q13495 774 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 PTPRRQ15256 657 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 PPP1R7Q15435 360 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 ZIC1Q15915 447 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CNGA2Q16280 664 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 KPRPQ5T749 579 aaPredicted RBP6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 LRRC38Q5VT99 294 aa6.96□□□□□ -1.3
EXOSC3-206ENST00000489414 CCDC137Q6PK04 289 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms