RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
CPSF3-204ENST00000489403 DHRS7Q9Y394 339 aa11.72□□□□□ -0.53
CPSF3-204ENST00000489403 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
CPSF3-204ENST00000489403 SCN3AQ9NY46 2000 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 FAM237BA0A1B0GVD1 139 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 OR2W5A6NFC9 320 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CCL21O00585 134 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 ZBTB14O43829 449 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 KIF5CO60282 957 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CEP104O60308 925 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CYC1P08574 325 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CXCR5P32302 372 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 RPS15AP62244 130 aaKnown RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 TBPL1P62380 186 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 SARNPP82979 210 aaKnown RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 GPS1Q13098 491 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 THOC5Q13769 683 aaKnown RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 LONRF1Q17RB8 773 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 BTBD16Q32M84 506 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 MINDY4Q4G0A6 757 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 ZNF766Q5HY98 468 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 FCRLBQ6BAA4 426 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 PLAG1Q6DJT9 500 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 TMEM214Q6NUQ4 689 aaKnown RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 UBE2R2Q712K3 238 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 PIWIL4Q7Z3Z4 852 aaKnown RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 MRGPRGQ86SM5 289 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 GPR21Q99679 349 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CCDC68Q9H2F9 335 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 LZTFL1Q9NQ48 299 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 CCDC177Q9NQR7 707 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 TMEM184CQ9NVA4 438 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 C19orf25Q9UFG5 118 aaPredicted RBP11.71□□□□□ -0.53
CPSF3-204ENST00000489403 TEKT2Q9UIF3 430 aa11.71□□□□□ -0.53
CPSF3-204ENST00000489403 FBN2P35556 2912 aa11.71□□□□□ -0.54
CPSF3-204ENST00000489403 AKAP9Q99996 3911 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 KCNE1BA0A087WTH5 132 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 FEZF1A0PJY2 475 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 A8MUI8 341 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 SGK494L7N484 410 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 MLNP12872 115 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 HRH2P25021 359 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 ELAVL4P26378 380 aaKnown RBP11.7□□□□□ -0.54
CPSF3-204ENST00000489403 BCL6P41182 706 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 XCR1P46094 333 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 ST13P50502 369 aaKnown RBP11.7□□□□□ -0.54
CPSF3-204ENST00000489403 CSNK1G2P78368 415 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 MPP1Q00013 466 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 RBPJQ06330 500 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 PTK6Q13882 451 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 H3F3CQ6NXT2 135 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 TTC27Q6P3X3 843 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 ZNF662Q6ZS27 426 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 ANKRD37Q7Z713 158 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 AGGF1Q8N302 714 aaeCLIP11.7□□□□□ -0.542e-7■■■■□ 23.2
CPSF3-204ENST00000489403 ZNF808Q8N4W9 903 aaPredicted RBP11.7□□□□□ -0.54
CPSF3-204ENST00000489403 ZCCHC10Q8TBK6 192 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 MCOLN3Q8TDD5 553 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 MOCOSQ96EN8 888 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 SERPINB12Q96P63 405 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 SIGLEC12Q96PQ1 595 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 HOMER3Q9NSC5 361 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 SH2B3Q9UQQ2 575 aa11.7□□□□□ -0.54
CPSF3-204ENST00000489403 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
CPSF3-204ENST00000489403 ABCA12Q86UK0 2595 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 MAGEB16A2A368 324 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 SDR42E2A6NKP2 422 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 GOLGA8MH3BSY2 632 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 EIF3FO00303 357 aaPredicted RBP11.69□□□□□ -0.54
CPSF3-204ENST00000489403 SLC19A2O60779 497 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 RDH16O75452 317 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 HAUS5O94927 633 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 KRT14P02533 472 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 MYBL2P10244 700 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 POU3F2P20265 443 aaPredicted RBP11.69□□□□□ -0.54
CPSF3-204ENST00000489403 HTR1EP28566 365 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
CPSF3-204ENST00000489403 AGTR2P50052 363 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 TUBA3CQ13748 450 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.54
CPSF3-204ENST00000489403 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 TUBA3EQ6PEY2 450 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 RPTNQ6XPR3 784 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 MBOAT1Q6ZNC8 495 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 PCGF5Q86SE9 256 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 PDSS2Q86YH6 399 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 CRLF3Q8IUI8 442 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 KCT2Q8NC54 265 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 CAMKVQ8NCB2 501 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 MDS2Q8NDY4 140 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 TM4SF19Q96DZ7 209 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 THAP11Q96EK4 314 aa11.69□□□□□ -0.54
CPSF3-204ENST00000489403 ZNF354BQ96LW1 612 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms