RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CNDP1Q96KN2 507 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 C10orf90Q96M02 699 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 TSNARE1Q96NA8 513 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 OR2A5Q96R48 311 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 SPSB2Q99619 263 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 AIF1LQ9BQI0 150 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NUDT9Q9BW91 350 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 SGPP1Q9BX95 441 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 LHPPQ9H008 270 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 POPDC3Q9HBV1 291 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 RIC8BQ9NVN3 520 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 WWOXQ9NZC7 414 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 MKL2Q9ULH7 1088 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
HDAC6-232ENST00000489053 PSAT1Q9Y617 370 aa8.68□□□□□ -1.02
HDAC6-232ENST00000489053 KCNE1BA0A087WTH5 132 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TCRBV9S1A1TA0A576 114 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 IDSB3KWA1 339 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 H0YIG0 161 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 K7EM74 188 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 PSMD12O00232 456 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 FFAR3O14843 346 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CLGNO14967 610 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 GPR42O15529 346 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CNOT3O75175 753 aaKnown RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CEACAM4O75871 244 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 NSA2O95478 260 aaKnown RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ONECUT2O95948 504 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 HPP00738 406 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 C8orf89P0DMQ9 161 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 SPTBP11277 2137 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 HPDP32754 393 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 MAGEA4P43358 317 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 GCGRP47871 477 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TAS2R39P59534 338 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ATP6V0D1P61421 351 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CSNK1G2P78368 415 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 FOXK1P85037 733 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 NAB1Q13506 487 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ELOAQ14241 798 aaKnown RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF460Q14592 562 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 UAP1Q16222 522 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 IGFBP7Q16270 282 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 NADK2Q4G0N4 442 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 VWA2Q5GFL6 755 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 JMJD6Q6NYC1 403 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 COX15Q7KZN9 410 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ABHD13Q7L211 337 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 NDUFAF7Q7L592 441 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TMPRSS11BQ86T26 416 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TBC1D1Q86TI0 1168 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 GPSM1Q86YR5 675 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 KBTBD2Q8IY47 623 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 LRRC56Q8IYG6 542 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 KRT78Q8N1N4 520 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TCAIMQ8N3R3 496 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 SNX31Q8N9S9 440 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 MFSD9Q8NBP5 474 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 OR9A4Q8NGU2 314 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CCT6BQ92526 530 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ANKRD7Q92527 254 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 EXT2Q93063 718 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 PNPLA2Q96AD5 504 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 PDLIM5Q96HC4 596 aaKnown RBP8.67□□□□□ -1.02
HDAC6-232ENST00000489053 FAR2Q96K12 515 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 PHACTR1Q9C0D0 580 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TSPYL1Q9H0U9 437 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF160Q9HCG1 818 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 SLC22A11Q9NSA0 550 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 MOCS1Q9NZB8 636 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 CD274Q9NZQ7 290 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 LUZP4Q9P127 313 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 HCN3Q9P1Z3 774 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 TEKT2Q9UIF3 430 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 RNF112Q9ULX5 631 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 OARD1Q9Y530 152 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 HS3ST3B1Q9Y662 390 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 IKBKGQ9Y6K9 419 aa8.67□□□□□ -1.02
HDAC6-232ENST00000489053 A0A088AWK7 358 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TRBC2A0A5B9 178 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 DYTNA2CJ06 578 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CTAGE15A4D2H0 777 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 VSTM2BA6NLU5 285 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SGK494L7N484 410 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CDC7O00311 574 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SOCS6O14544 535 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 P2RX6O15547 441 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PHGDHO43175 533 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ALOX12BO75342 701 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 WDR47O94967 919 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TSPAN12O95859 305 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PDGFAP04085 211 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TUBB4AP04350 444 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CTAGE8P0CG41 777 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CCDC166P0CW27 439 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms