RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 HM13Q8TCT9 377 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 PROKR1Q8TCW9 393 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 LKAAEAR1Q8TD35 194 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 GDPD5Q8WTR4 605 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 SKA2Q8WVK7 121 aaPredicted RBP6.42□□□□□ -1.38
PDCD4-209ENST00000489049 PYDC1Q8WXC3 89 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 ASB12Q8WXK4 309 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 ING5Q8WYH8 240 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 RELTQ969Z4 430 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 CXorf40BQ96DE9 158 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 NUS1Q96E22 293 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 WDR34Q96EX3 536 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 MAP6Q96JE9 813 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 MARK4Q96L34 752 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 FCRL1Q96LA6 429 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 CCDC115Q96NT0 180 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 FRG2BQ96QU4 278 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 PRPF18Q99633 342 aaKnown RBP6.42□□□□□ -1.38
PDCD4-209ENST00000489049 TMEM79Q9BSE2 394 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 HAUS8Q9BT25 410 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 EFCAB11Q9BUY7 163 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 DPY30Q9C005 99 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 ZDHHC4Q9NPG8 344 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 ACSS2Q9NR19 701 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 CCM2LQ9NUG4 571 aaPredicted RBP6.42□□□□□ -1.38
PDCD4-209ENST00000489049 PDP2Q9P2J9 529 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 SCOCQ9UIL1 159 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
PDCD4-209ENST00000489049 MAGEL2Q9UJ55 1249 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 ZNF490Q9ULM2 529 aaPredicted RBP6.42□□□□□ -1.38
PDCD4-209ENST00000489049 RAB26Q9ULW5 256 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 BTRCQ9Y297 605 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 TIMM22Q9Y584 194 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 PCDHA9Q9Y5H5 950 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 SNX13Q9Y5W8 968 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 KCNE2Q9Y6J6 123 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 CENPFP49454 3210 aa6.42□□□□□ -1.38
PDCD4-209ENST00000489049 COL6A3P12111 3177 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KCNE1BA0A087WTH5 132 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PRORSD1PA6NEY8 169 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 MGAT4DA6NG13 374 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 A8MX80 341 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PRRT4C9JH25 899 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 HRKO00198 91 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 FOXE1O00358 373 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ANKRD28O15084 1053 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 DENRO43583 198 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 SGTAO43765 313 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KDM1AO60341 852 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 SEC22BO75396 215 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RECQL5O94762 991 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KAT7O95251 611 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KCNH1O95259 989 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 HOXC4P09017 264 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 UQCRBP14927 111 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ITGB6P18564 788 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 CAPN3P20807 821 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PPIBP23284 216 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PSMA4P25789 261 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PRDX3P30048 256 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KIR2DL1P43626 348 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 KIR2DL2P43627 348 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 GPR1P46091 355 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 GSTM5P46439 218 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 DIO3P55073 304 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RNF4P78317 190 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 IRF8Q02556 426 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 MED21Q13503 144 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ZNF234Q14588 700 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ABRAXAS2Q15018 415 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 TRIP10Q15642 601 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ADRM1Q16186 407 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 MAPKAPK3Q16644 382 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 HIST2H2ACQ16777 129 aaPredicted RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PTCHD3Q3KNS1 767 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ATG9BQ674R7 924 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 HIST2H2AA3Q6FI13 130 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 SDE2Q6IQ49 451 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 GRHL2Q6ISB3 625 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 ANKRD54Q6NXT1 300 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 NEK5Q6P3R8 708 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 TMEM220Q6QAJ8 160 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 AGTRAPQ6RW13 159 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 IZUMO2Q6UXV1 221 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RPS27LQ71UM5 84 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 TRMT11Q7Z4G4 463 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RBM23Q86U06 439 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 TMEM151BQ8IW70 566 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 TBC1D21Q8IYX1 336 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RAB42Q8N4Z0 105 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 RASGEF1AQ8N9B8 481 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 PAPD5Q8NDF8 572 aaKnown RBP6.41□□□□□ -1.38
PDCD4-209ENST00000489049 VPS37AQ8NEZ2 397 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 OR2T11Q8NH01 316 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 OR2L2Q8NH16 312 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 CXorf40AQ8TE69 158 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 NRG4Q8WWG1 115 aa6.41□□□□□ -1.38
PDCD4-209ENST00000489049 SLC13A3Q8WWT9 602 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms