RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TMEM71Q6P5X7 295 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 RBM44Q6ZP01 1051 aaKnown RBP18.62■□□□□ 0.57
CCM2-216ENST00000488727 FRA10AC1Q70Z53 315 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 LARP4Q71RC2 724 aaKnown RBP eCLIP18.62■□□□□ 0.579e-6■■■■■ 29.6
CCM2-216ENST00000488727 DHDDSQ86SQ9 333 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 SLITRK4Q8IW52 837 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 LRRC56Q8IYG6 542 aaPredicted RBP18.62■□□□□ 0.57
CCM2-216ENST00000488727 FLVCR1-AS1Q8TAF5 88 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 CCDC124Q96CT7 223 aaKnown RBP18.62■□□□□ 0.57
CCM2-216ENST00000488727 PPM1MQ96MI6 270 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 TGM7Q96PF1 710 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 ZNF184Q99676 751 aaPredicted RBP18.62■□□□□ 0.57
CCM2-216ENST00000488727 TRIM54Q9BYV2 358 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 SEMA6CQ9H3T2 930 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 RNF112Q9ULX5 631 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 FIS1Q9Y3D6 152 aa18.62■□□□□ 0.57
CCM2-216ENST00000488727 SPTBN2O15020 2390 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 A0A1W2PPV9 198 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 GSAPA4D1B5 854 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 E7ENX8 843 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 STX16-NPEPL1H3BU86 382 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 STX16O14662 325 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 KIF1CO43896 1103 aaKnown RBP18.61■□□□□ 0.57
CCM2-216ENST00000488727 TAP2Q03519 686 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 ART3Q13508 389 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 CLPPQ16740 277 aaPredicted RBP18.61■□□□□ 0.57
CCM2-216ENST00000488727 TCHHL1Q5QJ38 904 aaPredicted RBP18.61■□□□□ 0.57
CCM2-216ENST00000488727 KANK2Q63ZY3 851 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 SUSD1Q6UWL2 747 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 GPSM1Q86YR5 675 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 PLXDC1Q8IUK5 500 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 SYTL1Q8IYJ3 562 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 RAB42Q8N4Z0 105 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 OR4D9Q8NGE8 314 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 EXT2Q93063 718 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 C19orf60Q96EN9 201 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 WDR41Q9HAD4 459 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 ACTR10Q9NZ32 417 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 KLHL3Q9UH77 587 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 POMT2Q9UKY4 750 aa18.61■□□□□ 0.57
CCM2-216ENST00000488727 IGHV5-10-1A0A0J9YXX1 117 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 NCF1BA6NI72 391 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 NCF1CA8MVU1 366 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 PRICKLE3O43900 615 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 MT-CO3P00414 261 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 RPS17P08708 135 aaKnown RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 NCF1P14598 390 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 PSMB5P28074 263 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 IRX1P78414 480 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 CDKL1Q00532 357 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 STX5Q13190 355 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PFKFB4Q16877 469 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 ARMC6Q6NXE6 501 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 AGTRAPQ6RW13 159 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 FAM92BQ6ZTR7 304 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 FBXO39Q8N4B4 442 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 SLC26A7Q8TE54 656 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 FBXL8Q96CD0 374 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 OR2A14Q96R47 310 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 ATG10Q9H0Y0 220 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PDP2Q9P2J9 529 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 BCAP29Q9UHQ4 241 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PABPN1LA6NDY0 278 aaKnown RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 C2orf74A8MZ97 194 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PSMD12O00232 456 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 AZIN1O14977 448 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 GFAPP14136 432 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 UGT2B7P16662 529 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PRDX3P30048 256 aaKnown RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 HSD17B2P37059 387 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 SH3BP2P78314 561 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 ZFP36L1Q07352 338 aaKnown RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 C18orf21Q32NC0 220 aaPredicted RBP18.6■□□□□ 0.57
CCM2-216ENST00000488727 SNAP47Q5SQN1 464 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 CLEC6AQ6EIG7 209 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 GK5Q6ZS86 529 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 KBTBD2Q8IY47 623 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 CHCHD4Q8N4Q1 142 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 PYDC1Q8WXC3 89 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 CDRT15Q96T59 188 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 DPYSL5Q9BPU6 564 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 CLCA2Q9UQC9 943 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 ENTPD2Q9Y5L3 495 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 KIF26BQ2KJY2 2108 aa18.6■□□□□ 0.57
CCM2-216ENST00000488727 ADAMTS20P59510 1910 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 ISM1B1AKI9 464 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 SUPT3HB4E1H0 165 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 SUPT3HO75486 399 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 SIX3O95343 332 aaPredicted RBP18.59■□□□□ 0.57
CCM2-216ENST00000488727 BAG2O95816 211 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 ANXA5P08758 320 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 LSSP48449 732 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 TBPL1P62380 186 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 CDC16Q13042 620 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 LCP2Q13094 533 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 KIR2DS3Q14952 304 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 ISXQ2M1V0 245 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 SPESP1Q6UW49 350 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 MARCH9Q86YJ5 346 aa18.59■□□□□ 0.57
CCM2-216ENST00000488727 EFCAB3Q8N7B9 438 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms