RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 WASH6PQ9NQA3 447 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 C8orf4Q9NR00 106 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM120CQ9NX05 1096 aaKnown RBP6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 UBAP1Q9NZ09 502 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 LIMD1Q9UGP4 676 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 ZNF639Q9UID6 485 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 BTNL2Q9UIR0 455 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 SUFUQ9UMX1 484 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 AURKCQ9UQB9 309 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 INVSQ9Y283 1065 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 PLEKHM1Q9Y4G2 1056 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 CHD9Q3L8U1 2897 aa6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM149AA5PLN7 773 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 DPPA5A6NC42 116 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PRR23AA6NEV1 266 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 EIF4E1BA6NMX2 242 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 EVPLLA8MZ36 301 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CLIC1O00299 241 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CACNB4O00305 520 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 UPK1AO00322 258 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 DLGAP1O14490 977 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SOCS2O14508 198 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FPGTO14772 594 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SLC31A1O15431 190 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CLOCKO15516 846 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PRICKLE3O43900 615 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PCDH7O60245 1069 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SH3BGRLO75368 114 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 GMNNO75496 209 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CREG1O75629 220 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SMNDC1O75940 238 aaKnown RBP eCLIP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PRSS23O95084 383 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 KCNK5O95279 499 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 APBB3O95704 486 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 C1QCP02747 245 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RETP07949 1114 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 ABCB1P08183 1280 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 UBTFL6P0CB48 400 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RAP2AP10114 183 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CKMT2P17540 419 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 IL1RNP18510 177 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SERPINB1P30740 379 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 MAT2AP31153 395 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SOX11P35716 441 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 HPCAL1P37235 193 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CCR8P51685 355 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CHN2P52757 468 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PPP2CBP62714 309 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PPP2CAP67775 309 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PHEXP78562 749 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 MEF2AQ02078 507 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 LRRC74AQ0VAA2 488 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PDE7AQ13946 482 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CLCA4Q14CN2 919 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RBBP5Q15291 538 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RPE65Q16518 533 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 UAP1L1Q3KQV9 507 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FBXO43Q4G163 708 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM98BQ52LJ0 330 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 NHSL2Q5HYW2 709 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 EOGTQ5NDL2 527 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 DEPDC1Q5TB30 811 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM71E1Q6IPT2 247 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 TMEM92Q6UXU6 159 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 GCNT7Q6ZNI0 430 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 ZBTB49Q6ZSB9 765 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 ZNF621Q6ZSS3 439 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 ZNF551Q7Z340 670 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 GPR155Q7Z3F1 870 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 COMMD6Q7Z4G1 85 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SERPINA11Q86U17 422 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SLC9B2Q86UD5 537 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM124AQ86V42 546 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 TRIM69Q86WT6 500 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 C10orf111Q8N326 155 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PGBD3Q8N328 593 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RAB42Q8N4Z0 105 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 MFSD2AQ8NA29 543 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 LINC01555Q8NAE3 123 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 DENND6BQ8NEG7 585 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 VPS37AQ8NEZ2 397 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 GPR156Q8NFN8 814 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 OR2L8Q8NGY9 312 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 GOT1L1Q8NHS2 421 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 NETO1Q8TDF5 533 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 C16orf78Q8WTQ4 265 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FIG4Q92562 907 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 NELL1Q92832 810 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SH3KBP1Q96B97 665 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 MTERF3Q96E29 417 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 FAM120BQ96EK7 910 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 AURKBQ96GD4 344 aaPredicted RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 REXO5Q96IC2 774 aaKnown RBP6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 C12orf66Q96MD2 445 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 RNF145Q96MT1 663 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 PANX1Q96RD7 426 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 SEPHS2Q99611 448 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 CIB1Q99828 191 aa6.47□□□□□ -1.37
RN7SL561P-201ENST00000488553 AIF1LQ9BQI0 150 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms