RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RARRES3Q9UL19 164 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 STK38LQ9Y2H1 464 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 ASB1Q9Y576 335 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 UNC13CQ8NB66 2214 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CFAP54Q96N23 3096 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 IGKV1-8A0A0C4DH67 115 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 POM121CA8CG34 1229 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TMEM150CB9EJG8 249 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 H3BQF6 201 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TXNDC9O14530 226 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 HAT1O14929 419 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 OR1F1O43749 312 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 CLDN9O95484 217 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 OTCP00480 354 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 EIF2S1P05198 315 aaKnown RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 RPS17P08708 135 aaKnown RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 MSL3P1P0C860 447 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 CCL4P13236 92 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ETV4P43268 484 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 SERPINB4P48594 390 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 MAPK10P53779 464 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 CDH13P55290 713 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TUBB3Q13509 450 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 MPP2Q14168 576 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 DOC2AQ14183 400 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 PCLAFQ15004 111 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 GPR19Q15760 415 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TBCCQ15814 346 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 UNC50Q53HI1 259 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 C3orf38Q5JPI3 329 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TCTE1Q5JU00 501 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 DCAF12Q5T6F0 453 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 LIPJQ5W064 366 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ZNF425Q6IV72 752 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 CEACAM20Q6UY09 585 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 PPP1R3BQ86XI6 285 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 MARCH9Q86YJ5 346 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 GPR135Q8IZ08 494 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 LSMEM2Q8N112 164 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 DNAJC22Q8N4W6 341 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ZNF655Q8N720 491 aaPredicted RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 TTLQ8NG68 377 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TRPC4APQ8TEL6 797 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ZNF483Q8TF39 744 aaPredicted RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 CNDP1Q96KN2 507 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TAAR9Q96RI9 348 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ZPBPQ9BS86 351 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 NLNQ9BYT8 704 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 ASPSCR1Q9BZE9 553 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 SLC7A5P2Q9GIP4 190 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 PITHD1Q9GZP4 211 aaPredicted RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 POLR1BQ9H9Y6 1135 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 EML4Q9HC35 981 aaKnown RBP9.86□□□□□ -0.83
SKA1-204ENST00000488454 MLXIPLQ9NP71 852 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 PISDQ9UG56 409 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 SATB2Q9UPW6 733 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 SH2B3Q9UQQ2 575 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 AK5Q9Y6K8 562 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 DMXL1Q9Y485 3027 aa9.86□□□□□ -0.83
SKA1-204ENST00000488454 TRBC2A0A5B9 178 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 FEZF1A0PJY2 475 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 ANKDD1BA6NHY2 528 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 MEN1O00255 615 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 UGDHO60701 494 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CTSVO60911 334 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CRCPO75575 148 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 OR2B3O76000 313 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 TNFSF15O95150 251 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 SERPIND1P05546 499 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 FGF3P11487 239 aaPredicted RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 HGFP14210 728 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 TSPAN8P19075 237 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 EPORP19235 508 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 HNF4AP41235 474 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CASP2P42575 452 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 PKNOX1P55347 436 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 ITGA1P56199 1179 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 VSX2P58304 361 aaPredicted RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 PPP2R2AP63151 447 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 GABREP78334 506 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 MEF2AQ02078 507 aaPredicted RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 PCDH1Q08174 1060 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CYP4F3Q08477 520 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 LCP2Q13094 533 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 SLBPQ14493 270 aaKnown RBP eCLIP9.85□□□□□ -0.83
SKA1-204ENST00000488454 DEFB110Q30KQ9 67 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 TTC19Q6DKK2 380 aaPredicted RBP9.85□□□□□ -0.83
SKA1-204ENST00000488454 MED27Q6P2C8 311 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 TMIGD1Q6UXZ0 262 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 RNF44Q7L0R7 432 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 PLD3Q8IV08 490 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 TRIM42Q8IWZ5 723 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 ARFGAP2Q8N6H7 521 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 MFSD9Q8NBP5 474 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 CAMKVQ8NCB2 501 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 DYDC1Q8WWB3 177 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 USP7Q93009 1102 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 REPS1Q96D71 796 aa9.85□□□□□ -0.83
SKA1-204ENST00000488454 WDR34Q96EX3 536 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms