RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 DENND2DQ9H6A0 471 aaPredicted RBP12.24□□□□□ -0.45
NELFE-209ENST00000488426 KIR3DX1Q9H7L2 352 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 CAAP1Q9H8G2 361 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 PELI2Q9HAT8 420 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SLC52A3Q9NQ40 469 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 TBC1D29Q9UFV1 150 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SLC7A8Q9UHI5 535 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SH2B3Q9UQQ2 575 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 SNX11Q9Y5W9 270 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 TMEM131Q92545 1883 aa12.24□□□□□ -0.45
NELFE-209ENST00000488426 ZZEF1O43149 2961 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 PIPSLA2A3N6 862 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 FOXE1O00358 373 aaPredicted RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 TNFP01375 233 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 DPP6P42658 865 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ZFP36L2P47974 494 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 MTTPP55157 894 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 HLA-BQ31612 363 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 CATSPEREQ5SY80 951 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 RD3Q7Z3Z2 195 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 DCP2Q8IU60 420 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 HID1Q8IV36 788 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 SLC22A18ASQ8N1D0 253 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 GLB1L3Q8NCI6 653 aaPredicted RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 CLPTM1LQ96KA5 538 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 FCRL1Q96LA6 429 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 TEX37Q96LM6 180 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ZBTB18Q99592 522 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 TMEM168Q9H0V1 697 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ACTL8Q9H568 366 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 GAREM1Q9H706 876 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 DNAAF2Q9NVR5 837 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 VPS29Q9UBQ0 182 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 SUSD2Q9UGT4 822 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 WASF3Q9UPY6 502 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 DMXL2Q8TDJ6 3036 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 SPTY2D1-AS1A0A0U1RR47 76 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 CCDC154A6NI56 674 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 EEDO75530 441 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 SYPP08247 313 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 THEGLP0DJG4 465 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 CEACAM1P13688 526 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 AMD1P17707 334 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 CD27P26842 260 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ACTR1BP42025 376 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ACTR1AP61163 376 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 PHEXP78562 749 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 ILF3Q12906 894 aaKnown RBP eCLIP12.23□□□□□ -0.45
NELFE-209ENST00000488426 VPS26BQ4G0F5 336 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 KRT78Q8N1N4 520 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 FBXW8Q8N3Y1 598 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 LIX1Q8N485 282 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 LMNTD1Q8N9Z9 388 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 OR52E1Q8NGJ3 308 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 HUS1BQ8NHY5 278 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 SH3KBP1Q96B97 665 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 MTERF1Q99551 399 aaKnown RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 PITHD1Q9GZP4 211 aaPredicted RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 GID8Q9NWU2 228 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 NMRK1Q9NWW6 199 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 TAC3Q9UHF0 121 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 BAIAP2L1Q9UHR4 511 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 PNMA8BQ9ULN7 279 aaPredicted RBP12.23□□□□□ -0.45
NELFE-209ENST00000488426 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
NELFE-209ENST00000488426 A0A1W2PPV9 198 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 A6NCN8 305 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 SCAMP1O15126 338 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 PCNAP12004 261 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 BCKDHAP12694 445 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 CDH1P12830 882 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 F3P13726 295 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 CXCR2P25025 360 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 AK4P27144 223 aaPredicted RBP12.22□□□□□ -0.45
NELFE-209ENST00000488426 IL12AP29459 219 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 PIK3CBP42338 1070 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 PSME3P61289 254 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 FOXM1Q08050 763 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 C8orf82Q6P1X6 216 aaPredicted RBP12.22□□□□□ -0.45
NELFE-209ENST00000488426 PRMT9Q6P2P2 845 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 RETREG3Q86VR2 466 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 FAM129CQ86XR2 697 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 LINC01555Q8NAE3 123 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 ABHD11Q8NFV4 315 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 GPBAR1Q8TDU6 330 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 KLHDC7BQ96G42 594 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 APIPQ96GX9 242 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 DPY30Q9C005 99 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
NELFE-209ENST00000488426 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 CROTQ9UKG9 612 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 ICKQ9UPZ9 632 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 PCDHGA7Q9Y5G6 932 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 IGF2RP11717 2491 aa12.22□□□□□ -0.45
NELFE-209ENST00000488426 MAGEB17A8MXT2 336 aa12.21□□□□□ -0.45
NELFE-209ENST00000488426 CFLARO15519 480 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms