RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ARNTLO00327 626 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 MTHFD2P13995 350 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 AMD1P17707 334 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 NRIP1P48552 1158 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 CLCN7P51798 805 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 C2orf27AQ580R0 203 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF773Q6PK81 442 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 LGI4Q8N135 537 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 ST13P5Q8NFI4 369 aaPredicted RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 GEMIN6Q8WXD5 167 aaKnown RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 FBXL8Q96CD0 374 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 THUMPD1Q9NXG2 353 aaKnown RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 NUMBLQ9Y6R0 609 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 PIPSLA2A3N6 862 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 KMOO15229 486 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 SBK3P0C264 359 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 SLC35G6P0C7Q6 338 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 CCR7P32248 378 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 KDELR2P33947 212 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 STXBP1P61764 594 aaKnown RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 TBPL1P62380 186 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 MEF2AQ02078 507 aaPredicted RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 GSTM4Q03013 218 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 SLC9A5Q14940 896 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 ZNHIT3Q15649 155 aaPredicted RBP11.43□□□□□ -0.58
TRA2B-214ENST00000487615 GAREM2Q75VX8 874 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 NRSN1Q8IZ57 195 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 VAPAQ9P0L0 249 aa11.43□□□□□ -0.58
TRA2B-214ENST00000487615 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 TARM1B6A8C7 271 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 PLK4O00444 970 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 NUAK1O60285 661 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 OR10H2O60403 315 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 MPZL2O60487 215 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 C6orf47O95873 294 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 HPRP00739 348 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 NR2F6P10588 404 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CR2P20023 1033 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 MAGEA10P43363 369 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 IL18R1Q13478 541 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 OR52E8Q6IFG1 317 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 GATAD2AQ86YP4 633 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 SLC34A3Q8N130 599 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 C12orf76Q8N812 135 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 OR52L1Q8NGH7 329 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF597Q96LX8 424 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ANKRD60Q9BZ19 345 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 MTG2Q9H4K7 406 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 GSTK1Q9Y2Q3 226 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 LYVE1Q9Y5Y7 322 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 SLC16A8O95907 504 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 VIPP01282 170 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 OXTRP30559 389 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 MEP1AQ16819 746 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF630Q2M218 657 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CYBRD1Q53TN4 286 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 UGT2A3Q6UWM9 527 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CD300LGQ6UXG3 332 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 EPHX4Q8IUS5 362 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 RAB7BQ96AH8 199 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 LSM1O15116 133 aaKnown RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ABCB7O75027 752 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 RASGRP1O95267 797 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 PEX11BO96011 259 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 PRLP01236 227 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 TIE1P35590 1138 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CDKL1Q00532 357 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 ILF3Q12906 894 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 LAPTM4AQ15012 233 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 PON2Q15165 354 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 GTDC1Q4AE62 458 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 LHX8Q68G74 356 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 WDR36Q8NI36 951 aaKnown RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 IPCEF1Q8WWN9 437 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 C12orf43Q96C57 262 aaKnown RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 APIPQ96GX9 242 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 TRIM39Q9HCM9 518 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CRNNQ9UBG3 495 aaPredicted RBP11.42□□□□□ -0.58
TRA2B-214ENST00000487615 HS3ST2Q9Y278 367 aa11.42□□□□□ -0.58
TRA2B-214ENST00000487615 CBFA2T3O75081 653 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 BMP7P18075 431 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 FBXW4P57775 412 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ZNF33BQ06732 778 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 NPTX1Q15818 432 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 MSANTD1Q6ZTZ1 278 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 FUNDC1Q8IVP5 155 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 NFKBIDQ8NI38 313 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PSMA8Q8TAA3 256 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 BADQ92934 168 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 MYEOVQ96EZ4 313 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 GPATCH1Q9BRR8 931 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 BRINP2Q9C0B6 783 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 KAT8Q9H7Z6 458 aaKnown RBP11.41□□□□□ -0.58
TRA2B-214ENST00000487615 NEUROD4Q9HD90 331 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 TMEM9Q9P0T7 183 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 PLAGL1Q9UM63 463 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 HEBP2Q9Y5Z4 205 aa11.41□□□□□ -0.58
TRA2B-214ENST00000487615 ACOT8O14734 319 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms