RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 AWAT1Q58HT5 328 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 VWA5B1Q5TIE3 1220 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 LYPLAL1Q5VWZ2 237 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 FAM90A2PQ658T7 463 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 ARL6IP4Q66PJ3 421 aaKnown RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 C11orf87Q6NUJ2 197 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 PWWP2BQ6NUJ5 590 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 MSANTD2Q6P1R3 559 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 C22orf39Q6P5X5 142 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 SLC30A9Q6PML9 568 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 XKRXQ6PP77 449 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 CERS6Q6ZMG9 384 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 UNC93AQ86WB7 457 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 RASGRP3Q8IV61 690 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 UNC45BQ8IWX7 931 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 SLC38A9Q8NBW4 561 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 UBA3Q8TBC4 463 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 DQX1Q8TE96 717 aaKnown RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 SYAP1Q96A49 352 aaPredicted RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 DNAJC19Q96DA6 116 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 SLC39A13Q96H72 371 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 TAAR6Q96RI8 345 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 EIF3CQ99613 913 aaKnown RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 PRMT1Q99873 361 aaKnown RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 TMEM79Q9BSE2 394 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 BRD8Q9H0E9 1235 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 OLA1Q9NTK5 396 aaKnown RBP4.21□□□□□ -1.74
CNN3-206ENST00000487539 PDRG1Q9NUG6 133 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 ARL8BQ9NVJ2 186 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 ARHGEF38Q9NXL2 777 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 SEMA5BQ9P283 1151 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 C5AR2Q9P296 337 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 VPS28Q9UK41 221 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 HS3ST2Q9Y278 367 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 SNX10Q9Y5X0 201 aa4.21□□□□□ -1.74
CNN3-206ENST00000487539 FAM234BA2RU67 622 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 GOLGA6L3A6NEY3 463 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 LRRIQ3A6PVS8 624 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 C21orf140B9A014 251 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TGFB1I1O43294 461 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 STX6O43752 255 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ALOX12BO75342 701 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CD160O95971 181 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CALCAP01258 141 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CCNB1P14635 433 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 IGFBP2P18065 325 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SCP2P22307 547 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 PSMA5P28066 241 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 POLD2P49005 469 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 RGS7P49802 495 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CYP2J2P51589 502 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CCNHP51946 323 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 DAOAP59103 153 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 RAE1P78406 368 aaKnown RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 FOLH1Q04609 750 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ORC2Q13416 577 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 NFATC2Q13469 925 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 BIRC3Q13489 604 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SLC12A1Q13621 1099 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SNRNP35Q16560 246 aaKnown RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 ME3Q16798 604 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SYPL2Q5VXT5 272 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 FAAH2Q6GMR7 532 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 HMBOX1Q6NT76 420 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 FBXL22Q6P050 247 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 GFRALQ6UXV0 394 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SYVN1Q86TM6 617 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TAC4Q86UU9 113 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 HPS6Q86YV9 775 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ZADH2Q8N4Q0 377 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ZNF557Q8N988 423 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 SLC4A11Q8NBS3 891 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ACRBPQ8NEB7 543 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 OR56A4Q8NGH8 313 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 PARD3BQ8TEW8 1205 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TAF4BQ92750 862 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TBC1D10AQ9BXI6 508 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 UBXN6Q9BZV1 441 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TKTL2Q9H0I9 626 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 VPS16Q9H269 839 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SAP30LQ9HAJ7 183 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 PDE7BQ9NP56 450 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ABCC13Q9NSE7 274 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 ABHD10Q9NUJ1 306 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 OLAHQ9NV23 265 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 OGFRQ9NZT2 677 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 TINAGQ9UJW2 476 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 EXOC7Q9UPT5 735 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 CYP46A1Q9Y6A2 500 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 SIRT4Q9Y6E7 314 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 MGAM2Q2M2H8 2515 aa4.2□□□□□ -1.74
CNN3-206ENST00000487539 HRNRQ86YZ3 2850 aaPredicted RBP4.2□□□□□ -1.74
CNN3-206ENST00000487539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.2□□□□□ -1.745e-6■■□□□ 11.5
CNN3-206ENST00000487539 FRMD3A2A2Y4 597 aa4.19□□□□□ -1.74
CNN3-206ENST00000487539 TYW5A2RUC4 315 aaKnown RBP4.19□□□□□ -1.74
CNN3-206ENST00000487539 TRIM49BA6NDI0 452 aa4.19□□□□□ -1.74
CNN3-206ENST00000487539 TMEM110-MUSTN1A8MSY1 372 aa4.19□□□□□ -1.74
CNN3-206ENST00000487539 CREB3O43889 395 aa4.19□□□□□ -1.74
CNN3-206ENST00000487539 CRLF1O75462 422 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms