RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 GABRB3P28472 473 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 SOX11P35716 441 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TIAL1Q01085 375 aaKnown RBP eCLIP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 HP1BP3Q5SSJ5 553 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 CAPN13Q6MZZ7 669 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TMEM214Q6NUQ4 689 aaKnown RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 MBOAT1Q6ZNC8 495 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 SYDE1Q6ZW31 735 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 VN1R4Q7Z5H5 301 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 ASPGQ86U10 573 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 BCORP1Q8N888 145 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 GPATCH11Q8N954 259 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 SLC13A3Q8WWT9 602 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 HAS2Q92819 552 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 SLCO2A1Q92959 643 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 CERS2Q96G23 380 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 CYTH2Q99418 400 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 TUBB6Q9BUF5 446 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 FAM129AQ9BZQ8 928 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 ARL15Q9NXU5 204 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 HCN3Q9P1Z3 774 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 C19orf25Q9UFG5 118 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 OSGIN2Q9Y236 505 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 VWA7Q9Y334 891 aa11.79□□□□□ -0.52
SREBF1-215ENST00000487401 USP9XQ93008 2570 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-215ENST00000487401 SPTBP11277 2137 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 PRRC2CQ9Y520 2896 aaKnown RBP11.78□□□□□ -0.52
SREBF1-215ENST00000487401 FEZF1A0PJY2 475 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 A8MUI8 341 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 SGK494L7N484 410 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 JRKO75564 520 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 LDLRP01130 860 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CELA2AP08217 269 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CDH1P12830 882 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 BCL6P41182 706 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 ELK3P41970 407 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CCR8P51685 355 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 DR1Q01658 176 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 MORF4L2Q15014 288 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 PCOLCEQ15113 449 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 TEDDM1Q5T9Z0 273 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 HECTD2Q5U5R9 776 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 ABHD17BQ5VST6 288 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 DUPD1Q68J44 220 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 RPUSD3Q6P087 351 aaKnown RBP11.78□□□□□ -0.52
SREBF1-215ENST00000487401 LCTLQ6UWM7 567 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 MAMDC2Q7Z304 686 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CPEB2Q7Z5Q1 589 aaKnown RBP11.78□□□□□ -0.52
SREBF1-215ENST00000487401 GALNT7Q86SF2 657 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 IGDCC3Q8IVU1 814 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 KLHL7Q8IXQ5 586 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 MFSD9Q8NBP5 474 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 SUN3Q8TAQ9 357 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 ZCCHC10Q8TBK6 192 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 ATL1Q8WXF7 558 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 PSMF1Q92530 271 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CAPZA3Q96KX2 299 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 SGPP1Q9BX95 441 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 VN1R1Q9GZP7 353 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 OLAHQ9NV23 265 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 STMN3Q9NZ72 180 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 TEKT2Q9UIF3 430 aa11.78□□□□□ -0.52
SREBF1-215ENST00000487401 CORO1CQ9ULV4 474 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-215ENST00000487401 LRRTM2O43300 516 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 OR1F1O43749 312 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 LCMT2O60294 686 aaKnown RBP11.77□□□□□ -0.53
SREBF1-215ENST00000487401 SEC24DO94855 1032 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-215ENST00000487401 WDPCPO95876 746 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 F10P00742 488 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 CYC1P08574 325 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 SLC35G6P0C7Q6 338 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 ITGAMP11215 1152 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 NPPBP16860 134 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 IL1RNP18510 177 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 XCR1P46094 333 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 TNFSF10P50591 281 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 AP1S2P56377 157 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 ARL4CP56559 192 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 PER3P56645 1201 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 ACTN3Q08043 901 aaPredicted RBP11.77□□□□□ -0.53
SREBF1-215ENST00000487401 PHKG1Q16816 387 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 FAM45BPQ6NSW5 357 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 FAM45AQ8TCE6 357 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
SREBF1-215ENST00000487401 LRRC39Q96DD0 335 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 TM4SF19Q96DZ7 209 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 SNF8Q96H20 258 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 IMMP1LQ96LU5 166 aa11.77□□□□□ -0.53
SREBF1-215ENST00000487401 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms