RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ARHGDIAP52565 204 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 GTF2H3Q13889 308 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 HKDC1Q2TB90 917 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 ANXA8L1Q5VT79 327 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 MED27Q6P2C8 311 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 VPS37AQ8NEZ2 397 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 VN1R2Q8NFZ6 395 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 FBLIM1Q8WUP2 373 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 HERVK_113Q902F9 699 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 SNX19Q92543 992 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 SGCDQ92629 289 aa17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 DPH2Q9BQC3 489 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-207ENST00000486828 A0A1W2PPW3 197 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 C1orf226A1L170 272 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 TMX2-CTNND1H3BSU7 103 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 SOD1P00441 154 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 HTR1AP08908 422 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 AGXTP21549 392 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 PPIBP23284 216 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 TIA1P31483 386 aaKnown RBP eCLIP17.33■□□□□ 0.371e-6■□□□□ 11.1
PDLIM7-207ENST00000486828 MAGEA10P43363 369 aaPredicted RBP17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 STT3AP46977 705 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 TCEAL5Q5H9L2 206 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 CAPN13Q6MZZ7 669 aaPredicted RBP17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 CEP68Q76N32 757 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 TMPRSS11BQ86T26 416 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 CYP4Z1Q86W10 505 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 C12orf40Q86WS4 652 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 PIK3C3Q8NEB9 887 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 ZNF480Q8WV37 535 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 COQ8BQ96D53 544 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 REPS1Q96D71 796 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 LRRC3BQ96PB8 259 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 BARD1Q99728 777 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 LHPPQ9H008 270 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 CHST8Q9H2A9 424 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 CORO2BQ9UQ03 480 aa17.33■□□□□ 0.37
PDLIM7-207ENST00000486828 MGAT4DA6NG13 374 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 hCG_2039718K7EN88 272 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 SLC1A7O00341 560 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 LILRB5O75023 590 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 MITFO75030 526 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 UGT2B11O75310 529 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 SH3BGRLO75368 114 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 PRNPP04156 253 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 EFNA1P20827 205 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 FPR1P21462 350 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 IDSP22304 550 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 DNAJA1P31689 397 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 RPS13P62277 151 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 TBPL1P62380 186 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 FGD3Q5JSP0 725 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 GTF2IRD2BQ6EKJ0 949 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 VTCN1Q7Z7D3 282 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 GALNT10Q86SR1 603 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 GTF2IRD2Q86UP8 949 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 NPAS3Q8IXF0 933 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 GPR156Q8NFN8 814 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF566Q969W8 418 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 HSH2DQ96JZ2 352 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 ZCCHC2Q9C0B9 1178 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 TRIT1Q9H3H1 467 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 BAG5Q9UL15 447 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 FZD4Q9ULV1 537 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 SLC27A6Q9Y2P4 619 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 COQ6Q9Y2Z9 468 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 NAALAD2Q9Y3Q0 740 aa17.33■□□□□ 0.36
PDLIM7-207ENST00000486828 MYO1GB0I1T2 1018 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF197O14709 1029 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 CCDC159P0C7I6 412 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 DAPP51397 102 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 CCR3P51677 355 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 METAP1P53582 386 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 VLDLRP98155 873 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 RAPSNQ13702 412 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 C16orf72Q14CZ0 275 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 KDM4DQ6B0I6 523 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 GALNT18Q6P9A2 607 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 HORMAD1Q86X24 394 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 SYTL1Q8IYJ3 562 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 CFAP206Q8IYR0 622 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 CELF5Q8N6W0 485 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 SETD9Q8NE22 299 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 CXorf40BQ96DE9 158 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 THAP11Q96EK4 314 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 WDR34Q96EX3 536 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 RAD9AQ99638 391 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 ASPSCR1Q9BZE9 553 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 PLGRKTQ9HBL7 147 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 PRM3Q9NNZ6 103 aa17.32■□□□□ 0.36
PDLIM7-207ENST00000486828 GNG14A0A1W2PPG7 69 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 PCDH7O60245 1069 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 FKBP9O95302 570 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 NPPBP16860 134 aa17.31■□□□□ 0.36
PDLIM7-207ENST00000486828 LRRC74AQ0VAA2 488 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms