RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FBXL12Q9NXK8 326 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 SPATA7Q9P0W8 599 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 ACSL5Q9ULC5 683 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 PLAGL1Q9UM63 463 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 OR1A2Q9Y585 309 aa19.6■□□□□ 0.73
HPS3-206ENST00000486530 ATG2BQ96BY7 2078 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 GNG14A0A1W2PPG7 69 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 PLRG1O43660 514 aaKnown RBP19.59■□□□□ 0.73
HPS3-206ENST00000486530 PRSS23O95084 383 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 SMIM18P0DKX4 95 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 MYCLP1P12525 358 aaPredicted RBP19.59■□□□□ 0.73
HPS3-206ENST00000486530 DMPKQ09013 629 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 ZNF763Q0D2J5 394 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 SGCGQ13326 291 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 HKDC1Q2TB90 917 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 PYCR3Q53H96 274 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 SDE2Q6IQ49 451 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 KIAA1211LQ6NV74 962 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 VPS37AQ8NEZ2 397 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 GANCQ8TET4 914 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 SLC47A1Q96FL8 570 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 C1QTNF2Q9BXJ5 285 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 TRIT1Q9H3H1 467 aaKnown RBP19.59■□□□□ 0.73
HPS3-206ENST00000486530 DCAF13Q9NV06 445 aaKnown RBP19.59■□□□□ 0.73
HPS3-206ENST00000486530 OLAHQ9NV23 265 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 BTNL2Q9UIR0 455 aa19.59■□□□□ 0.73
HPS3-206ENST00000486530 DLGAP1O14490 977 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 EI24O14681 340 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 PAK4O96013 591 aaPredicted RBP19.58■□□□□ 0.73
HPS3-206ENST00000486530 LAMP1P11279 417 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 IL1RNP18510 177 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 LRRC74AQ0VAA2 488 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 CYP2A13Q16696 494 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 ANXA8L1Q5VT79 327 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 ENPP6Q6UWR7 440 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 FKBP9P1Q75LS8 142 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 KRT78Q8N1N4 520 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 C10orf111Q8N326 155 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 C1QTNF7Q9BXJ2 289 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 SPNS1Q9H2V7 528 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 MAGIXQ9H6Y5 334 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 CD207Q9UJ71 328 aa19.58■□□□□ 0.73
HPS3-206ENST00000486530 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.73
HPS3-206ENST00000486530 CLIC1O00299 241 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 DNTTP04053 509 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 ZNF23P17027 643 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 PON2Q15165 354 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 TMEM259Q4ZIN3 620 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 TMEM196Q5HYL7 178 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 KRT80Q6KB66 452 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 COMMD6Q7Z4G1 85 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 FAM86B1Q8N7N1 296 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 SH3KBP1Q96B97 665 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 COQ8BQ96D53 544 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 ADI1Q9BV57 179 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 MRPS26Q9BYN8 205 aaKnown RBP19.58■□□□□ 0.72
HPS3-206ENST00000486530 MKRN2Q9H000 416 aaKnown RBP19.58■□□□□ 0.72
HPS3-206ENST00000486530 PCBD2Q9H0N5 130 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 RMI1Q9H9A7 625 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 CARS2Q9HA77 564 aaKnown RBP19.58■□□□□ 0.72
HPS3-206ENST00000486530 PELI2Q9HAT8 420 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 PNPLA3Q9NST1 481 aa19.58■□□□□ 0.72
HPS3-206ENST00000486530 A0A1W2PPC1 479 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 GABRR3A8MPY1 467 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 ENGP17813 658 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 IDSP22304 550 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 MEF2AQ02078 507 aaPredicted RBP19.57■□□□□ 0.72
HPS3-206ENST00000486530 MERTKQ12866 999 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 ANKRD26P1Q6NSI1 321 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 TMIGD1Q6UXZ0 262 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 ZNF621Q6ZSS3 439 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 ARMCX6Q7L4S7 300 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 C17orf64Q86WR6 236 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 FAM129CQ86XR2 697 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 CLECL1Q8IZS7 167 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 OR14C36Q8NHC7 312 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 SNX19Q92543 992 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 PHF12Q96QT6 1004 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 TIMM29Q9BSF4 260 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 ATP6V1HQ9UI12 483 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 PADI4Q9UM07 663 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 BTBD3Q9Y2F9 522 aa19.57■□□□□ 0.72
HPS3-206ENST00000486530 A0A1W2PQU0 124 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 CPSF4O95639 269 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 TGFB1P01137 390 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 GPX2P18283 190 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 RPL3P39023 403 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 RPS9P46781 194 aaKnown RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 CLCNKAP51800 687 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SLC14A1Q13336 389 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 LIN52Q52LA3 116 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 FOXB2Q5VYV0 432 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 ERICH5Q6P6B1 374 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 IYDQ6PHW0 289 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 GPR155Q7Z3F1 870 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 METTL4Q8N3J2 472 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 KLK6Q92876 244 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 BHLHE41Q9C0J9 482 aaPredicted RBP19.56■□□□□ 0.72
HPS3-206ENST00000486530 NTN4Q9HB63 628 aa19.56■□□□□ 0.72
HPS3-206ENST00000486530 SMPD3Q9NY59 655 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms