RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ULBP3Q9BZM4 244 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 B3GNT4Q9C0J1 378 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 TXLNGQ9NUQ3 528 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 GEMIN8Q9NWZ8 242 aaKnown RBP10.9□□□□□ -0.66
NUP50-216ENST00000486184 PILRAQ9UKJ1 303 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 SRPK3Q9UPE1 567 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 PCDHGA7Q9Y5G6 932 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 PCDHGA3Q9Y5H0 932 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 B3GALT1Q9Y5Z6 326 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 AP1M2Q9Y6Q5 423 aa10.9□□□□□ -0.66
NUP50-216ENST00000486184 A0A1W2PNU3 283 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 ANKDD1BA6NHY2 528 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 H0YGG7 62 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 NVLO15381 856 aaKnown RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 CPNE3O75131 537 aaKnown RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 CRCPO75575 148 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 DXOO77932 396 aaKnown RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 CLDN9O95484 217 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 NUDT7P0C024 238 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 PCNAP12004 261 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 CD82P27701 267 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 GSTM2P28161 218 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 ALDH3A1P30838 453 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 SLC5A2P31639 672 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 AHRP35869 848 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 BCL6P41182 706 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 GABRA4P48169 554 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 SERPINB4P48594 390 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 ARSFP54793 590 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 NAGLUP54802 743 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 CDH13P55290 713 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 ARF3P61204 181 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 RGS1Q08116 209 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 LCP2Q13094 533 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 TBCCQ15814 346 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 FAM214AQ32MH5 1076 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 UNC50Q53HI1 259 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 WASHC2DQ5SRD0 308 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 LIPJQ5W064 366 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 TTC19Q6DKK2 380 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 GRHL2Q6ISB3 625 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 MED27Q6P2C8 311 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 FBXO42Q6P3S6 717 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 MILR1Q7Z6M3 343 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 ASPGQ86U10 573 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 NUDCD3Q8IVD9 361 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 CSNK1A1LQ8N752 337 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 CAMKVQ8NCB2 501 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 TRPV3Q8NET8 790 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 MGARPQ8TDB4 240 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 TRPC4APQ8TEL6 797 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 SLC13A3Q8WWT9 602 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 WDR34Q96EX3 536 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 PRR11Q96HE9 360 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 ZNF578Q96N58 590 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 NSUN5Q96P11 429 aaKnown RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 ACTR5Q9H9F9 607 aaPredicted RBP10.89□□□□□ -0.67
NUP50-216ENST00000486184 ZNF446Q9NWS9 450 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 NDOR1Q9UHB4 597 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 CACNA1AO00555 2505 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 SDK2Q58EX2 2172 aa10.89□□□□□ -0.67
NUP50-216ENST00000486184 KCNE1BA0A087WTH5 132 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 LOC105369274A0A096LPK9 316 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 LOC102723532A0A0G2JNH3 316 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 WDR91A4D1P6 747 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 URADA6NGE7 173 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 C9orf172C9J069 976 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 BIRC5O15392 142 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 NDUFS4O43181 175 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ZNF749O43361 778 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ATP8B1O43520 1251 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 HCRTR1O43613 425 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 STK17BO94768 372 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 BPGMP07738 259 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 CCNYL3P0C7X3 344 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 TSPAN8P19075 237 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 EPORP19235 508 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 SERPINB1P30740 379 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 CASP2P42575 452 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 SCTRP47872 440 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 CYP4F2P78329 520 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 NDUFA9Q16795 377 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 TTMPQ5BVD1 217 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 YOD1Q5VVQ6 348 aaPredicted RBP10.88□□□□□ -0.67
NUP50-216ENST00000486184 PWWP2BQ6NUJ5 590 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 FRMD7Q6ZUT3 714 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 GPRIN3Q6ZVF9 776 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 RPS27LQ71UM5 84 aaKnown RBP10.88□□□□□ -0.67
NUP50-216ENST00000486184 OR4N4Q8N0Y3 316 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 ZNF740Q8NDX6 193 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 OR52B6Q8NGF0 335 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 PMEPA1Q969W9 287 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 MECRQ9BV79 373 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 NTMT1Q9BV86 223 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 SARGQ9BW04 601 aa10.88□□□□□ -0.67
NUP50-216ENST00000486184 SPRTNQ9H040 489 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms