RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 C12orf66Q96MD2 445 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 SPSB2Q99619 263 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 CPNE1Q99829 537 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 MCMBPQ9BTE3 642 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 ZSCAN5AQ9BUG6 496 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 STMN4Q9H169 189 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 SOX17Q9H6I2 414 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 KIR3DX1Q9H7L2 352 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 SYTL2Q9HCH5 934 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 BPIFA1Q9NP55 256 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 PTGFRNQ9P2B2 879 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 MARCH4Q9P2E8 410 aaPredicted RBP9.37□□□□□ -0.91
SND1-213ENST00000486037 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 IKBKGQ9Y6K9 419 aa9.37□□□□□ -0.91
SND1-213ENST00000486037 IQANK1A0A1B0GTG1 560 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 RGSL1A5PLK6 1076 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 NKX2-6A6NCS4 301 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 TRIM49D1C9J1S8 452 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 POLR3GO15318 223 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 STX7O15400 261 aaKnown RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 PRAMEF2O60811 474 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 OR2B3O76000 313 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 RASAL1O95294 804 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 CELA2AP08217 269 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 SNRPAP09012 282 aaKnown RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 KRT15P19012 456 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 UGT1A4P22310 534 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 FOXN2P32314 431 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 HMGCLP35914 325 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 SLC1A2P43004 574 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 GYS2P54840 703 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 CASP6P55212 293 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 DCDC1P59894 354 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 PRAMEP78395 509 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 XIAPP98170 497 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 FOLH1Q04609 750 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 RBPJQ06330 500 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 TUBB8Q3ZCM7 444 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 ATP13A5Q4VNC0 1218 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 GRTP1Q5TC63 336 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 IRAK1BP1Q5VVH5 260 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 ZNF470Q6ECI4 717 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 LDB1Q86U70 411 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 AMZ2Q86W34 360 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 SPPL2CQ8IUH8 684 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 DTWD1Q8N5C7 304 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 LILRA3Q8N6C8 439 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 SIRT6Q8N6T7 355 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 BEND7Q8N7W2 519 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 RASGEF1AQ8N9B8 481 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 C2CD4AQ8NCU7 369 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 ACVR1CQ8NER5 493 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 PROKR1Q8TCW9 393 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 BRIX1Q8TDN6 353 aaKnown RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 AGAP11Q8TF27 550 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 NINJ1Q92982 152 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 RMDN2Q96LZ7 410 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 SRPK1Q96SB4 655 aaKnown RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 DMRTA2Q96SC8 542 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 RBBP8Q99708 897 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 FAM167BQ9BTA0 163 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 UCK2Q9BZX2 261 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 ZNF160Q9HCG1 818 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 FBXO6Q9NRD1 293 aaPredicted RBP9.36□□□□□ -0.91
SND1-213ENST00000486037 ZNF358Q9NW07 568 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 NSMCE4AQ9NXX6 385 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 ST6GALNAC2Q9UJ37 374 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 FBXO5Q9UKT4 447 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 PLEKHA6Q9Y2H5 1048 aa9.36□□□□□ -0.91
SND1-213ENST00000486037 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 OR2AG2A6NM03 316 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 H7C0S8 307 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 GAPDHSO14556 408 aaPredicted RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 CD3EAPO15446 510 aaKnown RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 WDPCPO95876 746 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 CRYABP02511 175 aaKnown RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 AHSGP02765 367 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 VCLP18206 1134 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 CNTFP26441 200 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 ATP5DP30049 168 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 MC4RP32245 332 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 HPDP32754 393 aaPredicted RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 CDKN1CP49918 316 aaPredicted RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 MEOX1P50221 254 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 HSF1Q00613 529 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 NKG7Q16617 165 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 MROH9Q5TGP6 573 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 AFTPHQ6ULP2 937 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 CLEC9AQ6UXN8 241 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 SH2D5Q6ZV89 423 aa9.35□□□□□ -0.91
SND1-213ENST00000486037 ZC3HC1Q86WB0 502 aaKnown RBP9.35□□□□□ -0.91
SND1-213ENST00000486037 CILP2Q8IUL8 1156 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms