RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GALNT16Q8N428 558 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CSNK1A1LQ8N752 337 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 GPATCH11Q8N954 259 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CAMKVQ8NCB2 501 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PPFIBP2Q8ND30 876 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 STT3BQ8TCJ2 826 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CDKL2Q92772 493 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 RERGQ96A58 199 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 LINGO1Q96FE5 620 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 UBXN10Q96LJ8 280 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 LMF1Q96S06 567 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 NDNQ99608 321 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 OLFM1Q99784 485 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CPNE1Q99829 537 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 TRIM31Q9BZY9 425 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PITHD1Q9GZP4 211 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 EPN3Q9H201 632 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 MKKSQ9NPJ1 570 aaPredicted RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 C14orf105Q9NVL8 296 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 GPR83Q9NYM4 423 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 RUVBL1Q9Y265 456 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 MAP4K5Q9Y4K4 846 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PSAT1Q9Y617 370 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
VPS50-218ENST00000485994 PTPN13Q12923 2485 aa6.66□□□□□ -1.34
VPS50-218ENST00000485994 LOC102723996A0A087X1L8 192 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 FAM95CA0A1B0GW59 222 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CLEC18AA5D8T8 446 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CDK2AP1O14519 115 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 LCMT2O60294 686 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 NRP2O60462 931 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SORBS2O94875 1100 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 BMP10O95393 424 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 MED26O95402 600 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 EIF2S1P05198 315 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 ANXA5P08758 320 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 ICAM2P13598 275 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 OTX2P32243 289 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SPRP35270 261 aaPredicted RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 GRK3P35626 688 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 AHRP35869 848 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 OR1D4P47884 311 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 AVPR1BP47901 424 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CCR8P51685 355 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TAS2R39P59534 338 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 GPX6P59796 221 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TBPL1P62380 186 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 AP2B1P63010 937 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 KLC1Q07866 573 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 PCDH1Q08174 1060 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 NAB1Q13506 487 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 PWP1Q13610 501 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 HKDC1Q2TB90 917 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CRB2Q5IJ48 1285 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 GRTP1Q5TC63 336 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 THEMIS2Q5TEJ8 643 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 FAM69BQ5VUD6 431 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 PRAMEF13Q5VWM6 474 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CPZQ66K79 652 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 JMJD6Q6NYC1 403 aaPredicted RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 TMEM205Q6UW68 189 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CLEC18BQ6UXF7 455 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 VN1R4Q7Z5H5 301 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 AFAP1L2Q8N4X5 818 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 RBMXL3Q8N7X1 1067 aaKnown RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 AMER3Q8N944 861 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 MFSD9Q8NBP5 474 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CLEC18CQ8NCF0 446 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TRPV3Q8NET8 790 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 OR11G2Q8NGC1 345 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 FBXO25Q8TCJ0 367 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.65□□□□□ -1.34
VPS50-218ENST00000485994 SLC13A3Q8WWT9 602 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TM9SF4Q92544 642 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 COL26A1Q96A83 441 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 PNPLA2Q96AD5 504 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 MIB2Q96AX9 1013 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TSPAN17Q96FV3 270 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CFAP36Q96G28 342 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SEC16BQ96JE7 1060 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 GPR22Q99680 433 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 NUDT9Q9BW91 350 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 CAPS2Q9BXY5 557 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 DERL2Q9GZP9 239 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 DRC3Q9H069 523 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 TSPYL1Q9H0U9 437 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 ATG10Q9H0Y0 220 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 NT5DC2Q9H857 520 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SYNPO2LQ9H987 977 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 LRRC4CQ9HCJ2 640 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SAYSD1Q9NPB0 183 aa6.65□□□□□ -1.34
VPS50-218ENST00000485994 SMYD2Q9NRG4 433 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms