RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RIPOR1Q6ZS17 1223 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 SPRED1Q7Z699 444 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
LRIF1-202ENST00000485275 CREB3L4Q8TEY5 395 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 C11orf24Q96F05 449 aaPredicted RBP13.93□□□□□ -0.18
LRIF1-202ENST00000485275 MACROD1Q9BQ69 325 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 SARGQ9BW04 601 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 ZFP69BQ9UJL9 534 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 PILRAQ9UKJ1 303 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 SLC12A4Q9UP95 1085 aa13.93□□□□□ -0.18
LRIF1-202ENST00000485275 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 C4orf51C9J302 202 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 SAP18O00422 153 aaKnown RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 CAPN5O15484 640 aaPredicted RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 RGS14O43566 566 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 RSL1D1O76021 490 aaKnown RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 UBOX5O94941 541 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 TGFB1P01137 390 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 ALPPL2P10696 532 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 CD1CP29017 333 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 HYAL2Q12891 473 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 COL9A2Q14055 689 aaPredicted RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 NR0B2Q15466 257 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 ATP6AP1LQ52LC2 224 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 METTL21CQ5VZV1 264 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 IRGCQ6NXR0 463 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 FAM92BQ6ZTR7 304 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 DGLUCYQ7Z3D6 616 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 TMPRSS9Q7Z410 1059 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 VN1R4Q7Z5H5 301 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 KRT78Q8N1N4 520 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 FNDC5Q8NAU1 212 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 BAHD1Q8TBE0 780 aaPredicted RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 MAP3K3Q99759 626 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 MRPL1Q9BYD6 325 aaKnown RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 OR51B5Q9H339 312 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 NT5DC2Q9H857 520 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 LRTM1Q9HBL6 345 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 RIC8BQ9NVN3 520 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 DNAAF2Q9NVR5 837 aaKnown RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 DLGAP4Q9Y2H0 992 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 POLR3HQ9Y535 204 aaPredicted RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 PCDHGA4Q9Y5G9 962 aa13.92□□□□□ -0.18
LRIF1-202ENST00000485275 COL5A1P20908 1838 aaPredicted RBP13.92□□□□□ -0.18
LRIF1-202ENST00000485275 EME2A4GXA9 379 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FOXE1O00358 373 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 UBDO15205 165 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ZNF806P0C7X5 589 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 HNRNPH1P31943 449 aaKnown RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ERVK-8P63133 956 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ZNF33BQ06732 778 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 HIST2H2ACQ16777 129 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 IMPG1Q17R60 797 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 AMZ1Q400G9 498 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 HIST2H2AA3Q6FI13 130 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FRMPD2BQ6IN97 320 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FBXO42Q6P3S6 717 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FIGLAQ6QHK4 219 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 DBX2Q6ZNG2 339 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ZFAND4Q86XD8 727 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 GBP7Q8N8V2 638 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 OR9I1Q8NGQ6 314 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 REPS1Q96D71 796 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 TEX37Q96LM6 180 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 TGM7Q96PF1 710 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 TRAPPC9Q96Q05 1148 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 MS4A8Q9BY19 250 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ACTL8Q9H568 366 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 AIG1Q9NVV5 245 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 SNX7Q9UNH6 387 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 GPR45Q9Y5Y3 372 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 COL27A1Q8IZC6 1860 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 CPED1A4D0V7 1026 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 EBAG9O00559 213 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 P2RX6O15547 441 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 VPS4BO75351 444 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 CBX6O95503 412 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 CTSBP07858 339 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ZNF883P0CG24 379 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 HSD3B1P14060 373 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 CXCR2P25025 360 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 HSD3B2P26439 372 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 GPR3P46089 330 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 RAE1P78406 368 aaKnown RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FAM91A1Q658Y4 838 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 PRR23CQ6ZRP0 262 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 RNF44Q7L0R7 432 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 CPSF7Q8N684 471 aaKnown RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 NUDT8Q8WV74 236 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 NCSTNQ92542 709 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 UBE2E3Q969T4 207 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 FCRL1Q96LA6 429 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms