RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MSRB3Q8IXL7 192 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 OR7A2PQ8NGA2 310 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 NELL1Q92832 810 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 GPR174Q9BXC1 333 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 REXO4Q9GZR2 422 aaKnown RBP16.06■□□□□ 0.16
CTSA-207ENST00000484855 PAIP1Q9H074 479 aaKnown RBP16.06■□□□□ 0.16
CTSA-207ENST00000484855 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 VCX3BQ9H321 246 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 PIF1Q9H611 641 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 SERHLQ9NQF3 203 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 PNMA8BQ9ULN7 279 aaPredicted RBP16.06■□□□□ 0.16
CTSA-207ENST00000484855 MAPRE3Q9UPY8 281 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 MRPS17Q9Y2R5 130 aaKnown RBP16.06■□□□□ 0.16
CTSA-207ENST00000484855 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 COLEC10Q9Y6Z7 277 aa16.06■□□□□ 0.16
CTSA-207ENST00000484855 A0A096LPI6 279 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ANKDD1BA6NHY2 528 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 AQP12BA6NM10 295 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 H7BY64 318 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
CTSA-207ENST00000484855 SCAMP2O15127 329 aaKnown RBP16.05■□□□□ 0.16
CTSA-207ENST00000484855 PEX2P28328 305 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 HTR1EP28566 365 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 OXTRP30559 389 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 CYP4F3Q08477 520 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 GAS6Q14393 721 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ALG11Q2TAA5 492 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 LRIF1Q5T3J3 769 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 LPCAT4Q643R3 524 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ABRAXAS1Q6UWZ7 409 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 WASH2PQ6VEQ5 465 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ABI3BPQ7Z7G0 1075 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 SPPL2CQ8IUH8 684 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 AQP12AQ8IXF9 295 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 TMEM132CQ8N3T6 1108 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 OR13H1Q8NG92 308 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 CCL4L1Q8NHW4 92 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 PRAP1Q96NZ9 151 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ECSITQ9BQ95 431 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 RHBGQ9H310 441 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 KIR3DX1Q9H7L2 352 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 SIRT5Q9NXA8 310 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 WSB2Q9NYS7 404 aaPredicted RBP16.05■□□□□ 0.16
CTSA-207ENST00000484855 SLC25A37Q9NYZ2 338 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 ADGRE2Q9UHX3 823 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 USP22Q9UPT9 525 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 AP4S1Q9Y587 144 aa16.05■□□□□ 0.16
CTSA-207ENST00000484855 EML2O95834 649 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 PTX3P26022 381 aaPredicted RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 CD6P30203 668 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 SLC7A1P30825 629 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 SOX11P35716 441 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 HPCAL1P37235 193 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 ZNF763Q0D2J5 394 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 LRRC36Q1X8D7 754 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 GTDC1Q4AE62 458 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 RUNDC3AQ59EK9 446 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 KBTBD2Q8IY47 623 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 BIRC7Q96CA5 298 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 DUS3LQ96G46 650 aaKnown RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 ZNF184Q99676 751 aaPredicted RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 SH3GL1Q99961 368 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 INPP5KQ9BT40 448 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 THUMPD3Q9BV44 507 aaKnown RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 RIMS3Q9UJD0 308 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 DMTF1Q9Y222 760 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 TRBV5-3A0A0A0MS03 114 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 FEZF1A0PJY2 475 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 RFXANKO14593 260 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 B3GALT4O96024 378 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 NDUFS1P28331 727 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 CYP4F2P78329 520 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 PRDX1Q06830 199 aaKnown RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 AASDHQ4L235 1098 aaPredicted RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 IZUMO2Q6UXV1 221 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 ADCK2Q7Z695 626 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 LILRA2Q8N149 483 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 SLC22A18ASQ8N1D0 253 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 ANKRD53Q8N9V6 530 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 OR4K1Q8NGD4 311 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 OR8J2Q8NGG1 315 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 OR2A1Q8NGT9 310 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 WDR48Q8TAF3 677 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 ZNF570Q96NI8 536 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 TPSD1Q9BZJ3 242 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 PITHD1Q9GZP4 211 aaPredicted RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 SLC6A13Q9NSD5 602 aa16.04■□□□□ 0.16
CTSA-207ENST00000484855 FAM120CQ9NX05 1096 aaKnown RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 ARHGEF17Q96PE2 2063 aaPredicted RBP16.04■□□□□ 0.16
CTSA-207ENST00000484855 KRBA1A5PL33 1030 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 ACADSP16219 412 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 NCK1P16333 377 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 SERPINB1P30740 379 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 OR4D2P58180 307 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 FXNQ16595 210 aa16.03■□□□□ 0.16
CTSA-207ENST00000484855 ANKRD26P1Q6NSI1 321 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms