RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 ZNF540Q8NDQ6 660 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 KBTBD8Q8NFY9 601 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 PSMA8Q8TAA3 256 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 LNX1Q8TBB1 728 aaPredicted RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 PHLDA1Q8WV24 401 aaPredicted RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 SORCS1Q8WY21 1168 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 RBM18Q96H35 190 aaKnown RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 C16orf45Q96MC5 204 aaPredicted RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF48Q96MX3 618 aaPredicted RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 TSSK2Q96PF2 358 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 ASCL2Q99929 193 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 C17orf62Q9BQA9 187 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 IDI2Q9BXS1 227 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 CCSER1Q9C0I3 900 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 OR2B2Q9GZK3 357 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 UBQLN3Q9H347 655 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 TSPY26PQ9H489 355 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 RPF1Q9H9Y2 349 aaKnown RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 TCF7L2Q9NQB0 619 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 ZCCHC3Q9NUD5 404 aaKnown RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 OR6C2Q9NZP2 312 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 TRIM10Q9UDY6 481 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 HOOK1Q9UJC3 728 aaKnown RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 FOXA2Q9Y261 457 aaPredicted RBP3.31□□□□□ -1.88
CLCC1-209ENST00000482889 VDAC3Q9Y277 283 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 ITM2BQ9Y287 266 aa3.31□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF521Q96K83 1311 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TRAV18A0A075B6X5 111 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TRBV5-5A0A0J9YX44 114 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 A0A0U1RRA0 63 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 LOC101059948A0A1B0GTJ6 334 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 A0A1W2PPI3 338 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CFAP73A6NFT4 308 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 E5RGE8 158 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TULP2O00295 520 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 SYNGR3O43761 229 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 XPNPEP2O43895 674 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PRKRAO75569 313 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 RAD51DO75771 328 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 OR6B1O95007 311 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TRIM16O95361 564 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 DIRAS3O95661 229 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 MT-ATP6P00846 226 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PRSS2P07478 247 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 MYL6BP14649 208 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 IL10P22301 178 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 LHCGRP22888 699 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ELAVL4P26378 380 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PRDX6P30041 224 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CHRNA3P32297 505 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 OR1D2P34982 312 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PITPNBP48739 271 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PEX5P50542 639 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF132P52740 706 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 MLLT10P55197 1068 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 SLC26A5P58743 744 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 EEF1A1P68104 462 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ZXDBP98169 803 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 KIF5AQ12840 1032 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TRIM29Q14134 588 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 GAMTQ14353 236 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 KIR2DS3Q14952 304 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 PHKG1Q16816 387 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 SIRPB2Q5JXA9 342 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 C12orf60Q5U649 245 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 EEF1A1P5Q5VTE0 462 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CAPRIN2Q6IMN6 1127 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CTR9Q6PD62 1173 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.3□□□□□ -1.888e-7■□□□□ 9.8
CLCC1-209ENST00000482889 GPR141Q7Z602 305 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 EXOC3L1Q86VI1 746 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 STHQ8IWL8 128 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 DCP1BQ8IZD4 617 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 MUC20Q8N307 709 aaPredicted RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 RYBPQ8N488 228 aaPredicted RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CCDC63Q8NA47 563 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 OR4A16Q8NH70 328 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 CD99L2Q8TCZ2 262 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF473Q8WTR7 871 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 GGHQ92820 318 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 SLC47A1Q96FL8 570 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ADGRG7Q96K78 797 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ZNF385AQ96PM9 386 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 URM1Q9BTM9 101 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 TSPYL1Q9H0U9 437 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 C10orf88Q9H8K7 445 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 NGBQ9NPG2 151 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 GPR173Q9NS66 373 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 FAM212BQ9NTI7 297 aaPredicted RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
CLCC1-209ENST00000482889 UBQLN2Q9UHD9 624 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 ZDHHC2Q9UIJ5 367 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 SLC7A7Q9UM01 511 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 NSG2Q9Y328 171 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 R4GN57 208 aa3.3□□□□□ -1.88
CLCC1-209ENST00000482889 RAD54L2Q9Y4B4 1467 aa3.29□□□□□ -1.88
CLCC1-209ENST00000482889 IGHV4OR15-8A0A075B7B6 117 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms