RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 C2P06681 752 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 MPC1LP0DKB6 136 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 PYGBP11216 843 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 MTHFD1P11586 935 aaKnown RBP13.89□□□□□ -0.19
USP11-207ENST00000478596 RORAP35398 523 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 SLC19A1P41440 591 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 TLE4Q04727 773 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 RASA2Q15283 850 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 TSNAXIP1Q2TAA8 658 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 UNC5DQ6UXZ4 953 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 UBE2R2Q712K3 238 aaPredicted RBP13.89□□□□□ -0.19
USP11-207ENST00000478596 SPATA6LQ8N4H0 392 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 RAB42Q8N4Z0 105 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 CCDC63Q8NA47 563 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 CHTF18Q8WVB6 975 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 TFGQ92734 400 aaPredicted RBP13.89□□□□□ -0.19
USP11-207ENST00000478596 SPOCK3Q9BQ16 436 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 TRIM54Q9BYV2 358 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 OR52A5Q9H2C5 316 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 SCHIP1Q9P0W5 487 aaPredicted RBP13.89□□□□□ -0.19
USP11-207ENST00000478596 ZNF624Q9P2J8 865 aaPredicted RBP13.89□□□□□ -0.19
USP11-207ENST00000478596 RNF112Q9ULX5 631 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
USP11-207ENST00000478596 MAP1AP78559 2803 aaPredicted RBP13.88□□□□□ -0.19
USP11-207ENST00000478596 ACANP16112 2415 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 HMX2A2RU54 273 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 FOXO6A8MYZ6 492 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SUPT3HB4E1H0 165 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 PCDH17O14917 1159 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SUPT3HO75486 399 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SLCO2B1O94956 709 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 C8GP07360 202 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 KRT4P19013 534 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 TFEBP19484 476 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 AGAP20933 346 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 NDUFS1P28331 727 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 CCNFP41002 786 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 ATP6V0D1P61421 351 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 CDC16Q13042 620 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SP140Q13342 867 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 NCF4Q15080 339 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 RPE65Q16518 533 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 NEK10Q6ZWH5 1172 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 ADAMTSL2Q86TH1 951 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 TGIF2LYQ8IUE0 185 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SPNS2Q8IVW8 549 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 DCUN1D3Q8IWE4 304 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 RBM12BQ8IXT5 1001 aaKnown RBP13.88□□□□□ -0.19
USP11-207ENST00000478596 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 MAGEC3Q8TD91 643 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 ZNF501Q96CX3 271 aaPredicted RBP13.88□□□□□ -0.19
USP11-207ENST00000478596 EGFL8Q99944 293 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 DERL2Q9GZP9 239 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 ALG9Q9H6U8 611 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 SLC40A1Q9NP59 571 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 POT1Q9NUX5 634 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 OLAHQ9NV23 265 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 WDR37Q9Y2I8 494 aa13.88□□□□□ -0.19
USP11-207ENST00000478596 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 C19orf84I3L1E1 186 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 GLRA3O75311 464 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 HIST1H2AGP0C0S8 130 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 HIST1H2ADP20671 130 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 GMPRP36959 345 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 KCNK10P57789 538 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 PPP1CAP62136 330 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 HSD11B2P80365 405 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP11-207ENST00000478596 PRKG2Q13237 762 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 TSTA3Q13630 321 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 GBX1Q14549 363 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 ZNF169Q14929 603 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 TSNQ15631 228 aaKnown RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 ZNF658BQ4V348 819 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 ZNF324BQ6AW86 544 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 FAM180AQ6UWF9 173 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 IGFL2Q6UWQ7 119 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 TMEM207Q6UWW9 146 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 WASH2PQ6VEQ5 465 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 TIFABQ6ZNK6 161 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 TRABD2AQ86V40 505 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 BCORP1Q8N888 145 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 OR5AR1Q8NGP9 310 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 ANKRD49Q8WVL7 239 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 ISL2Q96A47 359 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 PGM2Q96G03 612 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 APOPT1Q96IL0 206 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 HIST1H2AHQ96KK5 128 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 HIST1H2AJQ99878 128 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 H2AFJQ9BTM1 129 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 MVB12BQ9H7P6 319 aa13.87□□□□□ -0.19
USP11-207ENST00000478596 UTP6Q9NYH9 597 aaKnown RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.87□□□□□ -0.19
USP11-207ENST00000478596 CIDEBQ9UHD4 219 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms