RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 MED26O95402 600 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 MTHFD2P13995 350 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 GNAZP19086 355 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ARSFP54793 590 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 FOXL2P58012 376 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 VAC14Q08AM6 782 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 SLBPQ14493 270 aaKnown RBP eCLIP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RBBP5Q15291 538 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CDKL4Q5MAI5 379 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ATP1A1-AS1Q5TC04 95 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 MLIPQ5VWP3 458 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 FAM198BQ6UWH4 519 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 LRRC70Q7Z2Q7 622 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 VN1R4Q7Z5H5 301 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CYP4X1Q8N118 509 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 TBC1D19Q8N5T2 526 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ABHD11Q8NFV4 315 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 PROKR1Q8TCW9 393 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 PHF21BQ96EK2 531 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 C10orf90Q96M02 699 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 LRFN5Q96NI6 719 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF285Q96NJ3 590 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 GBP5Q96PP8 586 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 AIF1LQ9BQI0 150 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 NLNQ9BYT8 704 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CD244Q9BZW8 370 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 IFT80Q9P2H3 777 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 OPTCQ9UBM4 332 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 GPN3Q9UHW5 284 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 KCND3Q9UK17 655 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 PTBP2Q9UKA9 531 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RAB21Q9UL25 225 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ANGPTL3Q9Y5C1 460 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 FITM1A5D6W6 292 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 C21orf140B9A014 251 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 K7ENP7 123 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MAP2K7O14733 419 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 FFAR3O14843 346 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GPR42O15529 346 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SMIM24O75264 130 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CDH16O75309 829 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SIX3O95343 332 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 RBP1P09455 135 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SLC35G6P0C7Q6 338 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 COL6A2P12110 1019 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GGT5P36269 586 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ARL1P40616 181 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 OR1D4P47884 311 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ALDH18A1P54886 795 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 RPS15P62841 145 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 DCDP81605 110 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 REEP5Q00765 189 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ERV3-1Q14264 604 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SETDB1Q15047 1291 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 NCF4Q15080 339 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MUM1Q2TAK8 710 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 FAM214AQ32MH5 1076 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 NKAIN1Q4KMZ8 207 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 XKR6Q5GH73 641 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF385CQ66K41 422 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 INO80CQ6PI98 192 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TIFABQ6ZNK6 161 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ASPGQ86U10 573 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MYLK4Q86YV6 388 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 C4orf33Q8N1A6 199 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TEX9Q8N6V9 391 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PTGR2Q8N8N7 351 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MZB1Q8WU39 189 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 UBTD2Q8WUN7 234 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SLC13A3Q8WWT9 602 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CCT6BQ92526 530 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 SLC45A3Q96JT2 553 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 DPH2Q9BQC3 489 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MRPL57Q9BQC6 102 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 EFHD1Q9BUP0 239 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 YIPF2Q9BWQ6 316 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MRPL46Q9H2W6 279 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PPCSQ9HAB8 311 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 GEMIN8Q9NWZ8 242 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 LHX6Q9UPM6 363 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 PLAAQ9Y263 795 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 NUP210LQ5VU65 1888 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 MED13Q9UHV7 2174 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 A0A0A6YYC8 382 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TRBC2A0A5B9 178 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 CDC14CA4D256 554 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF891A8MT65 544 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 I3L1I5 382 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 K7EPI3 171 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TXNDC9O14530 226 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 TERTO14746 1132 aaKnown RBP6.57□□□□□ -1.36
BRCA1-215ENST00000478531 NKX2-8O15522 239 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 NUDT17P0C025 328 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 C1GALT1C1LP0DN25 315 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 IL1RNP18510 177 aa6.57□□□□□ -1.36
BRCA1-215ENST00000478531 ITGAXP20702 1163 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms