RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 GEMIN6Q8WXD5 167 aaKnown RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 AP3S1Q92572 193 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DPYSL5Q9BPU6 564 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 TRIM39Q9HCM9 518 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 AIG1Q9NVV5 245 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 PDYNP01213 254 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 RPS21P63220 83 aaKnown RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DOC2AQ14183 400 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 TOR1AIP1Q5JTV8 583 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 ABHD13Q7L211 337 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 OR51V1Q9H2C8 321 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 MYO10Q9HD67 2058 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 XKRYO14609 159 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 AIREO43918 545 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 RSL1D1O76021 490 aaKnown RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 MPC1LP0DKB6 136 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 ATF6P18850 670 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 PRKACGP22612 351 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 FMO3P31513 532 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 SFT2D3Q587I9 215 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 SLC15A3Q8IY34 581 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 PYURFQ96I23 114 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 ZNF354BQ96LW1 612 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 TOX2Q96NM4 488 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 SLC46A2Q9BY10 475 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 USP54Q70EL1 1684 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 A0A1B0GW55 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 GNB5O14775 395 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L2P0CJ85 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L3P0CJ86 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L4P0CJ87 422 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L5P0CJ88 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L6P0CJ89 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4L7P0CJ90 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 MAGP20916 626 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 CTSOP43234 321 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-208ENST00000478423 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 SLC30A8Q8IWU4 369 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 MOSPD2Q8NHP6 518 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 RFKQ969G6 155 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 RELTQ969Z4 430 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 PTERQ96BW5 349 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 EXO5Q9H790 373 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 NECTIN3Q9NQS3 549 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DUX4Q9UBX2 424 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 UBXN7O94888 489 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 ZNF24P17028 368 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 RGRP47804 291 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 MASP1P48740 699 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 HTR6P50406 440 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 RAB14P61106 215 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 ZNF846Q147U1 533 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 RAB8BQ92930 207 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 RACGAP1Q9H0H5 632 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 ARNT2Q9HBZ2 717 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 SPATA2Q9UM82 520 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 NHSQ6T4R5 1651 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
NPHP4-208ENST00000478423 SLC16A5O15375 505 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 CFIP05156 583 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 POLR2CP19387 275 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-208ENST00000478423 LAPTM4AQ15012 233 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 MZT2BQ6NZ67 158 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 OR4C6Q8NH72 309 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
NPHP4-208ENST00000478423 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 SLC39A13Q96H72 371 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 SMIM14Q96QK8 99 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 DHRS4Q9BTZ2 278 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 RIMKLBQ9ULI2 386 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 CLCA3PQ9Y6N3 262 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 CPED1A4D0V7 1026 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 VEGFDO43915 354 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 REM1O75628 298 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 ALPPL2P10696 532 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 GNSP15586 552 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 TBPL1P62380 186 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 ARRDC2Q8TBH0 407 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 TP53INP1Q96A56 240 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 HSH2DQ96JZ2 352 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 REEP4Q9H6H4 257 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 PCTPQ9UKL6 214 aa13.75□□□□□ -0.21
NPHP4-208ENST00000478423 OAS3Q9Y6K5 1087 aaKnown RBP13.75□□□□□ -0.21
NPHP4-208ENST00000478423 KRT33AO76009 404 aa13.74□□□□□ -0.21
NPHP4-208ENST00000478423 H1F0P07305 194 aaKnown RBP13.74□□□□□ -0.21
NPHP4-208ENST00000478423 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-208ENST00000478423 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.74□□□□□ -0.216e-10■■■■■ 48.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms