RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 C10orf90Q96M02 699 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 GBP5Q96PP8 586 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 CD244Q9BZW8 370 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 RRAGDQ9NQL2 400 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 DNAJC11Q9NVH1 559 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 RUVBL1Q9Y265 456 aaKnown RBP9.8□□□□□ -0.84
HDAC6-222ENST00000478095 MAU2Q9Y6X3 613 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 CFAP47Q6ZTR5 3102 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
HDAC6-222ENST00000478095 K7ENP7 123 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 MAP2K7O14733 419 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 NKX2-8O15522 239 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PRAMEF4O60810 478 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 IPO13O94829 963 aaKnown RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SIX3O95343 332 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SERPIND1P05546 499 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 RBP1P09455 135 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 NUDT17P0C025 328 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 COL6A2P12110 1019 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 GNAZP19086 355 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 EPORP19235 508 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ITGAXP20702 1163 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 AGXTP21549 392 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 GGT5P36269 586 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 OR1D4P47884 311 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ARSFP54793 590 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 DCDP81605 110 aaKnown RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 REEP5Q00765 189 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 IFFO1Q0D2I5 559 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SLBPQ14493 270 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 RBBP5Q15291 538 aaKnown RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 CDKL4Q5MAI5 379 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PRAMEF9Q5VWM5 478 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 MLIPQ5VWP3 458 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 C16orf46Q6P387 395 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 INO80CQ6PI98 192 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ZNF517Q6ZMY9 492 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 LRRC70Q7Z2Q7 622 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ASPGQ86U10 573 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 TDRPQ86YL5 185 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PTGR2Q8N8N7 351 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ENDOVQ8N8Q3 282 aaKnown RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 MFSD9Q8NBP5 474 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 OR4K1Q8NGD4 311 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ZCCHC10Q8TBK6 192 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PROKR1Q8TCW9 393 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 UBTD2Q8WUN7 234 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PHF21BQ96EK2 531 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SLC45A3Q96JT2 553 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 SPSB2Q99619 263 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 ACTL8Q9H568 366 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PRORYQ9H606 182 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 PELI2Q9HAT8 420 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 TMEM216Q9P0N5 145 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 IFT80Q9P2H3 777 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 OPTCQ9UBM4 332 aa9.79□□□□□ -0.84
HDAC6-222ENST00000478095 MRPS2Q9Y399 296 aaKnown RBP9.79□□□□□ -0.84
HDAC6-222ENST00000478095 LAMA5O15230 3695 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 KCNE1BA0A087WTH5 132 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 A0A0A6YYC8 382 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 TRBC2A0A5B9 178 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 C21orf140B9A014 251 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 C9J4A7 227 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 I3L1I5 382 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 K7EPI3 171 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 FFAR3O14843 346 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 CLGNO14967 610 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 DSCR3O14972 297 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 GPR42O15529 346 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 NDUFS4O43181 175 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 KLK8O60259 260 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 CNOT3O75175 753 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 CDH16O75309 829 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 CAPN1P07384 714 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 SBK3P0C264 359 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 C1GALT1C1LP0DN25 315 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 RPS15P62841 145 aaKnown RBP9.78□□□□□ -0.84
HDAC6-222ENST00000478095 RELAQ04206 551 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ERV3-1Q14264 604 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 NCF4Q15080 339 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 FAM214AQ32MH5 1076 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 NKAIN1Q4KMZ8 207 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 XKR6Q5GH73 641 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 GPR155Q7Z3F1 870 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 TMEM151BQ8IW70 566 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 C4orf33Q8N1A6 199 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ARHGEF39Q8N4T4 335 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 MREGQ8N565 214 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 TEX9Q8N6V9 391 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ANKRD53Q8N9V6 530 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 ZSCAN1Q8NBB4 408 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 KCT2Q8NC54 265 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 SLC13A3Q8WWT9 602 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 THAP11Q96EK4 314 aa9.78□□□□□ -0.84
HDAC6-222ENST00000478095 MOCOSQ96EN8 888 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms