RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CDKN3Q16667 212 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 IMPG1Q17R60 797 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 LEXMQ3ZCV2 418 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZBED5Q49AG3 693 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM201Q5SNT2 666 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SPOUT1Q5T280 376 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MPP7Q5T2T1 576 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GPRC6AQ5T6X5 926 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRAMEF13Q5VWM6 474 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CDCP2Q5VXM1 449 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZDHHC20Q5W0Z9 365 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ISLR2Q6UXK2 745 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SLC39A5Q6ZMH5 540 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TPGS1Q6ZTW0 290 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MSANTD1Q6ZTZ1 278 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 USP51Q70EK9 711 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 LRRC70Q7Z2Q7 622 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ARHGAP22Q7Z5H3 698 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GPR65Q8IYL9 337 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TCEAL8Q8IYN2 117 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SLC39A11Q8N1S5 342 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NXPE1Q8N323 547 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF786Q8N393 782 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF420Q8TAQ5 688 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ITFG1Q8TB96 612 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 FAM110BQ8TC76 370 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 LKAAEAR1Q8TD35 194 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CYGBQ8WWM9 190 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SLC13A3Q8WWT9 602 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MRPS31Q92665 395 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 USP7Q93009 1102 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TRIM43Q96BQ3 446 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SDCCAG3Q96C92 435 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 RHBDF1Q96CC6 855 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 EID2BQ96D98 161 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM169Q96HH4 297 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 RNF145Q96MT1 663 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF558Q96NG5 402 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 LYSMD1Q96S90 227 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SEPHS2Q99611 448 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CDC6Q99741 560 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 C17orf80Q9BSJ5 609 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CHID1Q9BWS9 393 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 APOL5Q9BWW9 433 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 OSBPL6Q9BZF3 934 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 TM6SF2Q9BZW4 377 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 DPY30Q9C005 99 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ACTL8Q9H568 366 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 RPF2Q9H7B2 306 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GORASP2Q9H8Y8 452 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 LRTM1Q9HBL6 345 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 MRPL17Q9NRX2 175 aaKnown RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ABCB8Q9NUT2 735 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GPATCH2Q9NW75 528 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ELOVL2Q9NXB9 296 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SMPD4Q9NXE4 827 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ETAA1Q9NY74 926 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 EVLQ9UI08 416 aaPredicted RBP4.8□□□□□ -1.64
SF3B6-202ENST00000478050 GPR160Q9UJ42 338 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ADAM30Q9UKF2 790 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 SH3BP1Q9Y3L3 701 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CCL27Q9Y4X3 112 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 INSL5Q9Y5Q6 135 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 CPQQ9Y646 472 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 PRSS21Q9Y6M0 314 aa4.8□□□□□ -1.64
SF3B6-202ENST00000478050 ZFYVE26Q68DK2 2539 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 A0A096LPI6 279 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ELOVL7A1L3X0 281 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PABPN1LA6NDY0 278 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 TMEM221A6NGB7 291 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 FAM220BPB1ANY3 271 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NPIPB8E9PQR5 432 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 M0R296 226 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 KPNA5O15131 536 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SLC16A5O15375 505 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 SMAD6O43541 496 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 DFNA5O60443 496 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ULK1O75385 1050 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 ERN1O75460 977 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 STK16O75716 305 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 RSL1D1O76021 490 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CLDN7O95471 211 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CLDN9O95484 217 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 GUCA1CO95843 209 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 C8GP07360 202 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 CLTBP09497 229 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 OR56A5P0C7T3 313 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 THRBP10828 461 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 IL1RNP18510 177 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NELFEP18615 380 aaKnown RBP4.79□□□□□ -1.64
SF3B6-202ENST00000478050 LAG3P18627 525 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 PRPH2P23942 346 aa4.79□□□□□ -1.64
SF3B6-202ENST00000478050 NFKBIAP25963 317 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms