RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TNNT3P45378 269 aaPredicted RBP6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ASCL1P50553 236 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 SLC26A5P58743 744 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 TAS2R40P59535 323 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 GPR85P60893 370 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 MPP3Q13368 585 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PTK6Q13882 451 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 FAM53BQ14153 422 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 CAPRIN1Q14444 709 aaKnown RBP6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 USP10Q14694 798 aaKnown RBP6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 POU4F3Q15319 338 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 TSNAXIP1Q2TAA8 658 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 KRTAP24-1Q3LI83 254 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 MINDY4Q4G0A6 757 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 SFT2D3Q587I9 215 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 NPNTQ6UXI9 565 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 RANBP10Q6VN20 620 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 SEM1Q6ZVN7 128 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 MDGA2Q7Z553 956 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PCGF5Q86SE9 256 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 VRK3Q8IV63 474 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PIANPQ8IYJ0 282 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ULK2Q8IYT8 1036 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 KIF2BQ8N4N8 673 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 NAXEQ8NCW5 288 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 PLPP5Q8NEB5 264 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 HMGCLL1Q8TB92 370 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 OR2A5Q96R48 311 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 SMC6Q96SB8 1091 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 LPAR4Q99677 370 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 MIPEPQ99797 713 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 DEPPQ9NTK1 212 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 DCTN4Q9UJW0 460 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 ANAPC7Q9UJX3 599 aa6.84□□□□□ -1.31
SPTLC1-205ENST00000477888 A0A0U1RQJ8 604 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 A0A1W2PPV9 198 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 C3orf70A6NLC5 250 aaPredicted RBP6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 HSPB2A8KAH6 182 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF487B1APH4 448 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 H0YIG0 161 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 FTH1P02794 183 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 BMP5P22003 454 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 MC4RP32245 332 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 GJC1P36383 396 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 PPIAP62937 165 aaKnown RBP6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 TYRO3Q06418 890 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 ACTN3Q08043 901 aaPredicted RBP6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 NSDHLQ15738 373 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 HSPB2Q16082 182 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 DBN1Q16643 649 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 C1orf185Q5T7R7 199 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 TRILQ7L0X0 811 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 KIF18BQ86Y91 864 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 DCUN1D3Q8IWE4 304 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 SLC22A15Q8IZD6 547 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 OR51Q1Q8NH59 317 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 SMPDL3BQ92485 455 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 LRRC46Q96FV0 321 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 PERPQ96FX8 193 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 SPATA13Q96N96 652 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 ERGIC2Q96RQ1 377 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 YIPF4Q9BSR8 244 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 DPH7Q9BTV6 452 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 CNPPD1Q9BV87 410 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 SMARCAL1Q9NZC9 954 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 SLC39A10Q9ULF5 831 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 MYO6Q9UM54 1294 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 VPS9D1Q9Y2B5 631 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 NPFFR2Q9Y5X5 522 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 LIPGQ9Y5X9 500 aa6.83□□□□□ -1.32
SPTLC1-205ENST00000477888 ARID1AO14497 2285 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 IGKV1-8A0A0C4DH67 115 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 LRRC10BA6NIK2 292 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 LGALS16A8MUM7 142 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 H7C0S8 307 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 QSOX1O00391 747 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CES2O00748 559 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 AQP7O14520 342 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 DVL2O14641 736 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 SUSD5O60279 629 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 PHF2O75151 1096 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 GPC4O75487 556 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 GLSO94925 669 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CRTAMO95727 393 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CYP1A2P05177 515 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CEACAM8P31997 349 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 CCR7P32248 378 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ADRA1AP35348 466 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 XCR1P46094 333 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 AVPR1BP47901 424 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 MPP1Q00013 466 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 SORDQ00796 357 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 RHAGQ02094 409 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 DMTNQ08495 405 aa6.82□□□□□ -1.32
SPTLC1-205ENST00000477888 ABRAXAS2Q15018 415 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms