RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TRA2BP62995 288 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 REEP5Q00765 189 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 PRDX1Q06830 199 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 KLC1Q07866 573 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 CYP4F3Q08477 520 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 TDGQ13569 410 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 CAPRIN1Q14444 709 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 PLA2G4EQ3MJ16 856 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 TMEM35AQ53FP2 167 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SLC44A4Q53GD3 710 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 CPTPQ5TA50 214 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 KIAA1324Q6UXG2 1013 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 IZUMO2Q6UXV1 221 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ZNF852Q6ZMS4 543 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SYT13Q7L8C5 426 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 CHST15Q7LFX5 561 aaPredicted RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 ERMP1Q7Z2K6 904 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SERPINA11Q86U17 422 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 DCP2Q8IU60 420 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 EID3Q8N140 333 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 PGBD3Q8N328 593 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 METTL4Q8N3J2 472 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ANKFN1Q8N957 763 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 AVL9Q8NBF6 648 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SRFBP1Q8NEF9 429 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 TRPV3Q8NET8 790 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ST13P5Q8NFI4 369 aaPredicted RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 OR2T12Q8NG77 320 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 OR5AR1Q8NGP9 310 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 RPLP0P6Q8NHW5 317 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 C12orf66Q96MD2 445 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 TSSK3Q96PN8 268 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 FERD3LQ96RJ6 166 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 NELL2Q99435 816 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 MTERF1Q99551 399 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 SLC39A3Q9BRY0 314 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 THUMPD3Q9BV44 507 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 SARGQ9BW04 601 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 PCDHAC1Q9H158 963 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 RAD21L1Q9H4I0 556 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 MAGIXQ9H6Y5 334 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 UBE2ZQ9H832 354 aaPredicted RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 MYNNQ9NPC7 610 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 OR6C2Q9NZP2 312 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 LIMD1Q9UGP4 676 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 ANAPC2Q9UJX6 822 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 RAB26Q9ULW5 256 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 SUFUQ9UMX1 484 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 INVSQ9Y283 1065 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 DLGAP4Q9Y2H0 992 aa7.64□□□□□ -1.19
VMA21-203ENST00000477649 TDRKHQ9Y2W6 561 aaKnown RBP7.64□□□□□ -1.19
VMA21-203ENST00000477649 CUL9Q8IWT3 2517 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TRBC2A0A5B9 178 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ELOVL7A1L3X0 281 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 FAM221BA6H8Z2 402 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 OR5K4A6NMS3 321 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PDZK1P1A8MUH7 402 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 GSTA4O15217 222 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SLC31A1O15431 190 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PCDH7O60245 1069 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 GUCY1B2O75343 617 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 CLEC3AO75596 197 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 EPN2O95208 641 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SEMA4FO95754 770 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 ABCB1P08183 1280 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 MTHFD1P11586 935 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 CDH1P12830 882 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 NDUFV2P19404 249 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 GGT1P19440 569 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 PKLRP30613 574 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 MAGEA8P43361 318 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TSFMP43897 325 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 TPMTP51580 245 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 GTF2A1P52655 376 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 DGKQP52824 942 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 RPS13P62277 151 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 RELAQ04206 551 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 MED21Q13503 144 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 DDX39BQ13838 428 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 PDE7AQ13946 482 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SMAD2Q15796 467 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 GRAMD1BQ3KR37 738 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 FAM98BQ52LJ0 330 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 RABL3Q5HYI8 236 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 INTS11Q5TA45 600 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 GLYATQ6IB77 296 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 CALHM3Q86XJ0 350 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TICAM1Q8IUC6 712 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SLC30A8Q8IWU4 369 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 KRTCAP2Q8N6L1 136 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 C1orf52Q8N6N3 182 aaKnown RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 TRIML2Q8N7C3 387 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
VMA21-203ENST00000477649 FAM156AQ8NDB6 213 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 SNX19Q92543 992 aa7.63□□□□□ -1.19
VMA21-203ENST00000477649 EME1Q96AY2 570 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms