RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ZNF551Q7Z340 670 aaPredicted RBP13□□□□□ -0.33
DFFB-209ENST00000477548 ATCAYQ86WG3 371 aa13□□□□□ -0.33
DFFB-209ENST00000477548 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
DFFB-209ENST00000477548 B3GNT7Q8NFL0 401 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SCAMP5Q8TAC9 235 aa13□□□□□ -0.33
DFFB-209ENST00000477548 ACAT2Q9BWD1 397 aa13□□□□□ -0.33
DFFB-209ENST00000477548 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
DFFB-209ENST00000477548 NIPAL2Q9H841 368 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SERHLQ9NQF3 203 aa13□□□□□ -0.33
DFFB-209ENST00000477548 CPA4Q9UI42 421 aa13□□□□□ -0.33
DFFB-209ENST00000477548 NUP50Q9UKX7 468 aa13□□□□□ -0.33
DFFB-209ENST00000477548 VPS4AQ9UN37 437 aa13□□□□□ -0.33
DFFB-209ENST00000477548 CMAHPQ9Y471 501 aa13□□□□□ -0.33
DFFB-209ENST00000477548 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
DFFB-209ENST00000477548 H3BRB1 525 aa13□□□□□ -0.33
DFFB-209ENST00000477548 RFXANKO14593 260 aa13□□□□□ -0.33
DFFB-209ENST00000477548 ULK1O75385 1050 aa13□□□□□ -0.33
DFFB-209ENST00000477548 PAHP00439 452 aa13□□□□□ -0.33
DFFB-209ENST00000477548 IGLV3-25P01717 112 aa13□□□□□ -0.33
DFFB-209ENST00000477548 C1QBP02746 253 aa13□□□□□ -0.33
DFFB-209ENST00000477548 HLA-DMAP28067 261 aa13□□□□□ -0.33
DFFB-209ENST00000477548 HSPA7P48741 367 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SLC9A3P48764 834 aa13□□□□□ -0.33
DFFB-209ENST00000477548 KCNQ1P51787 676 aa13□□□□□ -0.33
DFFB-209ENST00000477548 DSTNP60981 165 aa13□□□□□ -0.33
DFFB-209ENST00000477548 B2MP61769 119 aa13□□□□□ -0.33
DFFB-209ENST00000477548 PSPHP78330 225 aa13□□□□□ -0.33
DFFB-209ENST00000477548 MADCAM1Q13477 382 aa13□□□□□ -0.33
DFFB-209ENST00000477548 SLC35F1Q5T1Q4 408 aa13□□□□□ -0.33
DFFB-209ENST00000477548 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
DFFB-209ENST00000477548 AFTPHQ6ULP2 937 aa13□□□□□ -0.33
DFFB-209ENST00000477548 FBXL6Q8N531 539 aa13□□□□□ -0.33
DFFB-209ENST00000477548 GALNT6Q8NCL4 622 aa13□□□□□ -0.33
DFFB-209ENST00000477548 OR4K2Q8NGD2 314 aa13□□□□□ -0.33
DFFB-209ENST00000477548 WDR36Q8NI36 951 aaKnown RBP13□□□□□ -0.33
DFFB-209ENST00000477548 C9orf43Q8TAL5 461 aaPredicted RBP13□□□□□ -0.33
DFFB-209ENST00000477548 CD200R1Q8TD46 325 aa13□□□□□ -0.33
DFFB-209ENST00000477548 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
DFFB-209ENST00000477548 FEVQ99581 238 aa13□□□□□ -0.33
DFFB-209ENST00000477548 CCSER2Q9H7U1 834 aa13□□□□□ -0.33
DFFB-209ENST00000477548 ING3Q9NXR8 418 aa13□□□□□ -0.33
DFFB-209ENST00000477548 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
DFFB-209ENST00000477548 PDPK1O15530 556 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PDE9AO76083 593 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 SNAI1O95863 264 aaPredicted RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 BCKDHAP12694 445 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PRKACAP17612 351 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 KIR2DL3P43628 341 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 LHX1P48742 406 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TGM4P49221 684 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PCBP2Q15366 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
DFFB-209ENST00000477548 TATDN3Q17R31 274 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PTCHD3Q3KNS1 767 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 USP39Q53GS9 565 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 MARCH8Q5T0T0 291 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 OVOS1Q6IE37 1185 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 FAM217AQ8IXS0 508 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 RGL4Q8IZJ4 473 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TOR1AIP2Q8NFQ8 470 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 MTFMTQ96DP5 389 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 MRPL9Q9BYD2 267 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 ATPIF1Q9UII2 106 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 SMLR1H3BR10 107 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TSPAN3O60637 253 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TNFRSF21O75509 655 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 OR7A10O76100 309 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 VEPH1Q14D04 833 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 GPR19Q15760 415 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 SSX1Q16384 188 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 VMACQ2NL98 169 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TIGD3Q6B0B8 471 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 GPRC5AQ8NFJ5 357 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 MYLPFQ96A32 169 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 CCM2Q9BSQ5 444 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 MROH8Q9H579 483 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 ZNF226Q9NYT6 803 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 GLTPQ9NZD2 209 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 POLHQ9Y253 713 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 HCN4Q9Y3Q4 1203 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 MICAL3Q7RTP6 2002 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 FABP12A6NFH5 140 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TLR5O60602 858 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 CSF3P09919 207 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 RPS14P62263 151 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 MXD1Q05195 221 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 ZNF792Q3KQV3 632 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 PYDC2Q56P42 97 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 EIF3MQ7L2H7 374 aaKnown RBP12.99□□□□□ -0.33
DFFB-209ENST00000477548 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 REPS1Q96D71 796 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TSSK3Q96PN8 268 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 EPYCQ99645 322 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 TRIM62Q9BVG3 475 aa12.99□□□□□ -0.33
DFFB-209ENST00000477548 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms