RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LGI4Q8N135 537 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 BRI3BPQ8WY22 251 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 BARD1Q99728 777 aaKnown RBP18.07■□□□□ 0.48
VARS2-209ENST00000477288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.07■□□□□ 0.48
VARS2-209ENST00000477288 PCDHAC1Q9H158 963 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 EBF3Q9H4W6 596 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 Q9N2J8 555 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 SPEF1Q9Y4P9 236 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 UPK3BL1B0FP48 263 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 UPK3BL2E5RIL1 263 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 PRPS1L1P21108 318 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 DSG2Q14126 1118 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 DECR1Q16698 335 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 SPIN4Q56A73 249 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 CDKL4Q5MAI5 379 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 THOC6Q86W42 341 aaKnown RBP18.07■□□□□ 0.48
VARS2-209ENST00000477288 MINDY2Q8NBR6 621 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 PSKH2Q96QS6 385 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 FXYD6-FXYD2A0A087WZ82 144 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 SLC35F4A4IF30 521 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 HMGN1P05114 100 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 TYRP14679 529 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 TOMM5Q8N4H5 51 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 LSM14AQ8ND56 463 aaKnown RBP18.07■□□□□ 0.48
VARS2-209ENST00000477288 FXYD6Q9H0Q3 95 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 SERTAD3Q9UJW9 196 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 PCDHB3Q9Y5E6 796 aa18.07■□□□□ 0.48
VARS2-209ENST00000477288 ZNF670-ZNF695F2Z2N8 137 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 J3KR12 359 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 C8orf89P0DMQ9 161 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 VAMP1P23763 118 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 ERVK-8P63133 956 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 BNIP1Q12981 228 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 IRF2BP1Q8IU81 584 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 PHOSPHO1Q8TCT1 267 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 KIAA1143Q96AT1 154 aaPredicted RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 ERVK-18Q9QC07 812 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 C19orf25Q9UFG5 118 aaPredicted RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 GNG8Q9UK08 70 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 TRIM64BA6NI03 449 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 CBLP22681 906 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 ZNF41P51814 821 aaPredicted RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 DPYSL2Q16555 572 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 AVL9Q8NBF6 648 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 OR6N1Q8NGY5 312 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 FCGR1BQ92637 280 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 CCDC86Q9H6F5 360 aaKnown RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 NOCTQ9UK39 431 aaKnown RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 C14orf166Q9Y224 244 aaKnown RBP18.06■□□□□ 0.48
VARS2-209ENST00000477288 ACOX3O15254 700 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 CYP11A1P05108 521 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 NOXRED1Q6NXP6 359 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 SLC32A1Q9H598 525 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 XPNPEP1Q9NQW7 623 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 HEXBP07686 556 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 HLA-EP13747 358 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 GADD45AP24522 165 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 OR4F3Q6IEY1 312 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 ZNF227Q86WZ6 799 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 SCGB3A2Q96PL1 93 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 SRRDQ9UH36 339 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 TMED4Q7Z7H5 227 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 C12orf40Q86WS4 652 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 SNX29P2Q8IUI4 249 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 MTMR14Q8NCE2 650 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 DNAJB8Q8NHS0 232 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 TAMM41Q96BW9 452 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 SLC2A4RGQ9NR83 387 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 GIN1Q9NXP7 522 aa18.06■□□□□ 0.48
VARS2-209ENST00000477288 DPPA5A6NC42 116 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 BLOC1S5-TXNDC5H3BN57 136 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 ANXA8P13928 327 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 PTNP21246 168 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 RAB8AP61006 207 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 RAB12Q6IQ22 244 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 PAMR1Q6UXH9 720 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 NFKBIDQ8NI38 313 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 FLRT1Q9NZU1 646 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 TEX13DA0A0J9YY54 714 aaPredicted RBP18.05■□□□□ 0.48
VARS2-209ENST00000477288 EI24O14681 340 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 TPTEP56180 551 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 METTL27Q8N6F8 245 aaPredicted RBP18.05■□□□□ 0.48
VARS2-209ENST00000477288 ASB12Q8WXK4 309 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 SMPDL3AQ92484 453 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 ASPNQ9BXN1 380 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 ABCD2Q9UBJ2 740 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 LDB2O43679 373 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 UQCRC1P31930 480 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 TFGQ92734 400 aaPredicted RBP18.05■□□□□ 0.48
VARS2-209ENST00000477288 SLC5A7Q9GZV3 580 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 SLC22A4Q9H015 551 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 FGF18O76093 207 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 GALNT11Q8NCW6 608 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 C14orf105Q9NVL8 296 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 CLIC1O00299 241 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 IMPDH1P20839 514 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 PBX1P40424 430 aa18.05■□□□□ 0.48
VARS2-209ENST00000477288 ARHGAP1Q07960 439 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms