RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 EFR3AQ14156 821 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 PAN2Q504Q3 1202 aaKnown RBP14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 METTL23Q86XA0 190 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 PAWRQ96IZ0 340 aaKnown RBP14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 VPS35Q96QK1 796 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 CITED4Q96RK1 184 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 MCCC1Q96RQ3 725 aaPredicted RBP14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 KCNS3Q9BQ31 491 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 RNF167Q9H6Y7 350 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 RNF121Q9H920 327 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 LRTM1Q9HBL6 345 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 TMEM30AQ9NV96 361 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 ASB1Q9Y576 335 aa14.77□□□□□ -0.04
CLSTN1-205ENST00000477264 A0A0X1KG70 313 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 A0A1W2PQ09 198 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 CPNE3O75131 537 aaKnown RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 PCSK1P29120 753 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 S100A3P33764 101 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 ZNF140P52738 457 aaPredicted RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 PSPHP78330 225 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 RIPPLY1Q0D2K3 151 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 QPRTQ15274 297 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 TIGD5Q53EQ6 642 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 LYPD8Q6UX82 237 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 CBLL1Q75N03 491 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 TRIM46Q7Z4K8 759 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 MILR1Q7Z6M3 343 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 SDR16C5Q8N3Y7 309 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 GDPD1Q8N9F7 314 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 HMCESQ96FZ2 354 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 GTPBP2Q9BX10 602 aaKnown RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 POLR1EQ9GZS1 481 aaKnown RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 TNKS2Q9H2K2 1166 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 SERHLQ9NQF3 203 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 NUFIP1Q9UHK0 495 aaKnown RBP14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 STOML2Q9UJZ1 356 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 TLR6Q9Y2C9 796 aa14.77□□□□□ -0.05
CLSTN1-205ENST00000477264 TET1Q8NFU7 2136 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 hCG_2039718K7EN88 272 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 PDPK1O15530 556 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 CXCL10P02778 98 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 ITGB1P05556 798 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 STSP08842 583 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 CLTBP09497 229 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 CPN2P22792 545 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 CLCN4P51793 760 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 RABGGTBP53611 331 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 VLDLRP98155 873 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 TAGLNQ01995 201 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 RUNX1T1Q06455 604 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 PTPRNQ16849 979 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 DPY19L3Q6ZPD9 716 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 C1orf52Q8N6N3 182 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 NATD1Q8N6N6 113 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 DCBLD1Q8N8Z6 715 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 CD200R1Q8TD46 325 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 HASPINQ8TF76 798 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 KCNJ9Q92806 393 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 UBE2FQ969M7 185 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 MAP6Q96JE9 813 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 FYTTD1Q96QD9 318 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 SPATA9Q9BWV2 254 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 FAM83DQ9H4H8 585 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 TMEM248Q9NWD8 314 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 TRPS1Q9UHF7 1281 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 POFUT2Q9Y2G5 429 aa14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 TIMM13Q9Y5L4 95 aaPredicted RBP14.76□□□□□ -0.05
CLSTN1-205ENST00000477264 MYBPHLA2RUH7 354 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 OR6C70A6NIJ9 312 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 A8MVJ9 347 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 HOXA2O43364 376 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 MYCLP1P12525 358 aaPredicted RBP14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 PBX3P40426 434 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 TTPAP49638 278 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 RORCP51449 518 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 RAB25P57735 213 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 IL10RBQ08334 325 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 ZNF79Q15937 498 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 USP39Q53GS9 565 aaKnown RBP14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 SLC35F1Q5T1Q4 408 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 OR4F3Q6IEY1 312 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 METTL2BQ6P1Q9 378 aaKnown RBP14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 FAM171BQ6P995 826 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 HDDC2Q7Z4H3 204 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 ATCAYQ86WG3 371 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 ELMO1Q92556 727 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 TESCQ96BS2 214 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 HSH2DQ96JZ2 352 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 TTPALQ9BTX7 342 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 TAPBPLQ9BX59 468 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 AASDHPPTQ9NRN7 309 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 SIRT5Q9NXA8 310 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 ENOPH1Q9UHY7 261 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 ZNF490Q9ULM2 529 aaPredicted RBP14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 CMAHPQ9Y471 501 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 PCDHGB3Q9Y5G1 929 aa14.75□□□□□ -0.05
CLSTN1-205ENST00000477264 SNX8Q9Y5X2 465 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms