RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HSD17B2P37059 387 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MARCKSL1P49006 195 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 CASP6P55212 293 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 RBPJQ06330 500 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 SLC9A5Q14940 896 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MUM1Q2TAK8 710 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 DEFB110Q30KQ9 67 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF658BQ4V348 819 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 FAM182AQ5T1J6 154 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 RPUSD3Q6P087 351 aaKnown RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 FIGLAQ6QHK4 219 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 PPP1R32Q7Z5V6 425 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 SDCCAG8Q86SQ7 713 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 TRIM73Q86UV7 250 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 KBTBD2Q8IY47 623 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MPP5Q8N3R9 675 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 BCORP1Q8N888 145 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 SKA2Q8WVK7 121 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 MIEF2Q96C03 454 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 GORASP1Q9BQQ3 440 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 GOLPH3Q9H4A6 298 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 C10orf88Q9H8K7 445 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF304Q9HCX3 659 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 FAM60AQ9NP50 221 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 IMPACTQ9P2X3 320 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF282Q9UDV7 671 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 FBXL4Q9UKA2 621 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 RP1L1Q8IWN7 2480 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-214ENST00000477152 LRRK2Q5S007 2527 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 ICE1Q9Y2F5 2266 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 FLNCQ14315 2725 aa6.94□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CCL22O00626 93 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 PRMT5O14744 637 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 KRT86O43790 486 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 NDUFS3O75489 264 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CRYABP02511 175 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ANXA5P08758 320 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 PKMP14618 531 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 MAGP20916 626 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CMPK1P30085 196 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 FOXN2P32314 431 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 DCTP40126 519 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 GABRA4P48169 554 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CLCN7P51798 805 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ARG2P78540 354 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 EGR3Q06889 387 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 MFAP5Q13361 173 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 LONRF1Q17RB8 773 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 PRR30Q53SZ7 412 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CRB2Q5IJ48 1285 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 IGFL2Q6UWQ7 119 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 OTOAQ7RTW8 1153 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 OTUD6BQ8N6M0 293 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CCDC89Q8N998 374 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 TC2NQ8N9U0 490 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CFAP61Q8NHU2 1237 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 FAR1Q8WVX9 515 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 HDAC10Q969S8 669 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 C19orf60Q96EN9 201 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 MVB12AQ96EY5 273 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CNDP1Q96KN2 507 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CRB3Q9BUF7 120 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 SLC6A20Q9NP91 592 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 FAM114A2Q9NRY5 505 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 CATSPERZQ9NTU4 200 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 SPHK1Q9NYA1 384 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 SPATA7Q9P0W8 599 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 PAK5Q9P286 719 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 TEKT2Q9UIF3 430 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ERRFI1Q9UJM3 462 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ZNF148Q9UQR1 794 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 DRG1Q9Y295 367 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 MRPS2Q9Y399 296 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 TRAV17A0A0B4J275 112 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 HYKKA2RU49 373 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 SARNPP82979 210 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 OLIG2Q13516 323 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 NDUFA9Q16795 377 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ARMC3Q5W041 872 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ABHD17CQ6PCB6 329 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 STRA8Q7Z7C7 330 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 KCNMB4Q86W47 210 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 PIANPQ8IYJ0 282 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 TMEM52Q8NDY8 209 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 OR52K1Q8NGK4 314 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 NAT14Q8WUY8 206 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 MAIP1Q8WWC4 291 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 RERGQ96A58 199 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 THOC3Q96J01 351 aaKnown RBP6.93□□□□□ -1.3
BRCA1-214ENST00000477152 OLAHQ9NV23 265 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 C14orf105Q9NVL8 296 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 FBXL7Q9UJT9 491 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 ENTPD4Q9Y227 616 aa6.93□□□□□ -1.3
BRCA1-214ENST00000477152 SPTBN1Q01082 2364 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms