RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 A0A087X1B8 175 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 A0A0A6YYC8 382 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 A0A1B0GX78 115 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 A0A1W2PPM1 405 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 OR2W5A6NFC9 320 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 ZNF891A8MT65 544 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 SUPT3HB4E1H0 165 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 I3L1I5 382 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 SRPX2O60687 465 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 KERAO60938 352 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 ALOX12BO75342 701 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 SUPT3HO75486 399 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 DNAJB5O75953 348 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TBX6O95947 436 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 KLK3P07288 261 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 SLCO1A2P46721 670 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 DCDP81605 110 aaKnown RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 REEP5Q00765 189 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 GRM7Q14831 915 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TECRLQ5HYJ1 363 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 NXPE4Q6UWF7 544 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 SLCO4C1Q6ZQN7 724 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 CEP128Q6ZU80 1094 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 RPS27LQ71UM5 84 aaKnown RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 VN1R5Q7Z5H4 357 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TBC1D1Q86TI0 1168 aaPredicted RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 PRSS58Q8IYP2 241 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TMEM151AQ8N4L1 468 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 AMER3Q8N944 861 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 PDPRQ8NCN5 879 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 OR9A4Q8NGU2 314 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 ZCCHC10Q8TBK6 192 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 EPS8L3Q8TE67 593 aaKnown RBP11.84□□□□□ -0.51
APTX-220ENST00000476858 CABS1Q96KC9 395 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 NLNQ9BYT8 704 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TRIM55Q9BYV6 548 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TSPYL1Q9H0U9 437 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TXLNGQ9NUQ3 528 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 WWOXQ9NZC7 414 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TBK1Q9UHD2 729 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 ZNF180Q9UJW8 692 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 TCFL5Q9UL49 500 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 AP1M2Q9Y6Q5 423 aa11.84□□□□□ -0.51
APTX-220ENST00000476858 CACNA1GO43497 2377 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 ZNF860A6NHJ4 632 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 SMIM23A6NLE4 172 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 C21orf140B9A014 251 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 GOLGA8RI6L899 631 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 MAP2K7O14733 419 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 OR1F1O43749 312 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 CCNT2O60583 730 aaKnown RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 JRKO75564 520 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 C1QL1O75973 258 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 KLHL2O95198 593 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 SIX3O95343 332 aaPredicted RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 RAB40ALP0C0E4 278 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 IL1RNP18510 177 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 GGT5P36269 586 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 HSD17B3P37058 310 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 CCR8P51685 355 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 HYAL2Q12891 473 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 TCTE1Q5JU00 501 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 COLEC12Q5KU26 742 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 RNF175Q8N4F7 328 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 TTC29Q8NA56 475 aaPredicted RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 MFSD9Q8NBP5 474 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 AENQ8WTP8 325 aaKnown RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 UBLCP1Q8WVY7 318 aaPredicted RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 ATL1Q8WXF7 558 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 KCNK17Q96T54 332 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 SPSB2Q99619 263 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 HAUS8Q9BT25 410 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 PCBD2Q9H0N5 130 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 C12orf65Q9H3J6 166 aaKnown RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 KLHL31Q9H511 634 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 SOX17Q9H6I2 414 aaPredicted RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 NMRAL1Q9HBL8 299 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 IFT80Q9P2H3 777 aaPredicted RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 TLK1Q9UKI8 766 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 SRPK3Q9UPE1 567 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 PTRH2Q9Y3E5 179 aaKnown RBP11.83□□□□□ -0.52
APTX-220ENST00000476858 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
APTX-220ENST00000476858 KALRNO60229 2985 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 KCNE1BA0A087WTH5 132 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 A0A1B0GTL3 188 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 TRBC2A0A5B9 178 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 ONECUT2O95948 504 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 HBQ1P09105 142 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 NR1D1P20393 614 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 CCND1P24385 295 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 SCTRP47872 440 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 SERPINB9P50453 376 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 RPS15AP62244 130 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 RPS15P62841 145 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 RELAQ04206 551 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 CDC16Q13042 620 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 ATP1A4Q13733 1029 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms