RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SCN3AQ9NY46 2000 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 ALOX12BO75342 701 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 GMPRP36959 345 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 CCR8P51685 355 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 CDKL1Q00532 357 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 OCA2Q04671 838 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 FAM53BQ14153 422 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 ZKSCAN8Q15776 578 aaPredicted RBP20.1■□□□□ 0.81
LIME1-204ENST00000476183 SYT16Q17RD7 645 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 C18orf21Q32NC0 220 aaPredicted RBP20.1■□□□□ 0.81
LIME1-204ENST00000476183 CATSPEREQ5SY80 951 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 UBAP2Q5T6F2 1119 aaKnown RBP20.1■□□□□ 0.81
LIME1-204ENST00000476183 PRSS41Q7RTY9 318 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 ADAMTSL2Q86TH1 951 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 MFSD9Q8NBP5 474 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 NEIL2Q969S2 332 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 NACC2Q96BF6 587 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 TSPAN17Q96FV3 270 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 TSNARE1Q96NA8 513 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 CRB3Q9BUF7 120 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 SPNS1Q9H2V7 528 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 SEMA3GQ9NS98 782 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 GPR83Q9NYM4 423 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 TRPC4Q9UBN4 977 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 FBXL4Q9UKA2 621 aa20.1■□□□□ 0.81
LIME1-204ENST00000476183 PRRC2CQ9Y520 2896 aaKnown RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 ANXA5P08758 320 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 CCDC166P0CW27 439 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 STX2P32856 288 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 SPRP35270 261 aaPredicted RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 MAT1AQ00266 395 aaKnown RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 RBBP7Q16576 425 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 NDUFA9Q16795 377 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 GRTP1Q5TC63 336 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 TMEM214Q6NUQ4 689 aaKnown RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 ASPGQ86U10 573 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 THOC6Q86W42 341 aaKnown RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 GALNT16Q8N428 558 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 CLEC1AQ8NC01 280 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 KCT2Q8NC54 265 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 ZNF740Q8NDX6 193 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 OR9A4Q8NGU2 314 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 SLC5A11Q8WWX8 675 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 SMAD5Q99717 465 aaKnown RBP20.09■□□□□ 0.81
LIME1-204ENST00000476183 SARGQ9BW04 601 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 YIPF2Q9BWQ6 316 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 C3orf18Q9UK00 162 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 SLC22A14Q9Y267 594 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 ZNF451Q9Y4E5 1061 aa20.09■□□□□ 0.81
LIME1-204ENST00000476183 IGHEP01854 428 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 CD1DP15813 335 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 STMN1P16949 149 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 GRK3P35626 688 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 RAB10P61026 200 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 OR4D1Q15615 310 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 NADK2Q4G0N4 442 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 CMC1Q7Z7K0 106 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 CAMKVQ8NCB2 501 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 OR11G2Q8NGC1 345 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 SLC13A3Q8WWT9 602 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 RHBDF1Q96CC6 855 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 MOCOSQ96EN8 888 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 EGFL8Q99944 293 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 MAP4K5Q9Y4K4 846 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 PCDHGB7Q9Y5F8 929 aa20.08■□□□□ 0.81
LIME1-204ENST00000476183 RELNP78509 3460 aa20.08■□□□□ 0.8
LIME1-204ENST00000476183 CTAGE15A4D2H0 777 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 NCF1BA6NI72 391 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 NCF1CA8MVU1 366 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 PRPF4O43172 522 aaKnown RBP eCLIP20.07■□□□□ 0.89e-10■□□□□ 10.4
LIME1-204ENST00000476183 OR1F1O43749 312 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 WISP1O95388 367 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 ZIC2O95409 532 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 NCF1P14598 390 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 IL1RNP18510 177 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 GDF5P43026 501 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 SLC6A12P48065 614 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 EFNA3P52797 238 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 SOX8P57073 446 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 MYBPC3Q14896 1274 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 TGFBIQ15582 683 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 FRA10AC1Q70Z53 315 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 CTAGE6Q86UF2 777 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 ZC3H7AQ8IWR0 971 aaKnown RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 ZCCHC10Q8TBK6 192 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 C8orf44Q96CB5 159 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 UBXN10Q96LJ8 280 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 TGIF2Q9GZN2 237 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 ZNF552Q9H707 407 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 MKKSQ9NPJ1 570 aaPredicted RBP20.07■□□□□ 0.8
LIME1-204ENST00000476183 ATP13A2Q9NQ11 1180 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 NINJ2Q9NZG7 142 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 DYRK1BQ9Y463 629 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 FLNCQ14315 2725 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 CNTRLQ7Z7A1 2325 aa20.07■□□□□ 0.8
LIME1-204ENST00000476183 TRBC2A0A5B9 178 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 IDSB3KWA1 339 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 NSA2O95478 260 aaKnown RBP20.06■□□□□ 0.8
LIME1-204ENST00000476183 TUBB4AP04350 444 aa20.06■□□□□ 0.8
LIME1-204ENST00000476183 CTAGE8P0CG41 777 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms